RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 THBS2P35442 1172 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 TIAL1Q01085 375 aaKnown RBP eCLIP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 SLBPQ14493 270 aaKnown RBP eCLIP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ZNHIT3Q15649 155 aaPredicted RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CCL15Q16663 113 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CRB2Q5IJ48 1285 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 FAM69AQ5T7M9 428 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 DOK6Q6PKX4 331 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 GLDNQ6ZMI3 551 aaPredicted RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 TRIM46Q7Z4K8 759 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 TMEM200AQ86VY9 491 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 GPR137CQ8N3F9 429 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 FBXO39Q8N4B4 442 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF784Q8NCA9 323 aaPredicted RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 OR5M1Q8NGP8 315 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 PXYLP1Q8TE99 480 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 TMEM176AQ96HP8 235 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ARHGAP9Q9BRR9 750 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 FUZQ9BT04 418 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 GAR1Q9NY12 217 aaKnown RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 STOX2Q9P2F5 926 aaPredicted RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 TMEM184BQ9Y519 407 aaPredicted RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 MYO10Q9HD67 2058 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 TRDV1A0A1B0GX56 115 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 A0A1W2PRB8 838 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 TNFRSF10BO14763 440 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 ARPC1BO15143 372 aaKnown RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 PRKYO43930 277 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 B4GALT3O60512 393 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 KLHL18O94889 574 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 FARS2O95363 451 aaKnown RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 JCHAINP01591 159 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 RPA2P15927 270 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 HOXB9P17482 250 aaPredicted RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 MAPK3P27361 379 aaPredicted RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 HOXC12P31275 282 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 CHI3L1P36222 383 aaPredicted RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 CHRNA4P43681 627 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 OMPP47874 163 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 RBX1P62877 108 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 SLC7A9P82251 487 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 KLF9Q13886 244 aaPredicted RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 PAFAH1B3Q15102 231 aaKnown RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 AMHR2Q16671 573 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 KIAA0930Q6ICG6 404 aaPredicted RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 IL27RAQ6UWB1 636 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 CEACAM20Q6UY09 585 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 PTOV1Q86YD1 416 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 MARCH9Q86YJ5 346 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 ARIH2OSQ8N7S6 290 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 PCSK9Q8NBP7 692 aaKnown RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 FAM46DQ8NEK8 389 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 OR51S1Q8NGJ8 323 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 OR10D4PQ8NGN7 298 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 OR4A4PQ8NGN8 299 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 CLEC4CQ8WTT0 213 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 RAB24Q969Q5 203 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 CPNE2Q96FN4 548 aaPredicted RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 CNTNAP3BQ96NU0 1288 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 GAL3ST4Q96RP7 486 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 IFT27Q9BW83 186 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 TSSK6Q9BXA6 273 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 EPHX3Q9H6B9 360 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 SFXN1Q9H9B4 322 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 UQCC1Q9NVA1 299 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 PCTPQ9UKL6 214 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF705EA8MWA4 302 aaPredicted RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 TMEM229AB2RXF0 380 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 OR4E1P0C645 316 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 LINC00614P0C842 121 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 C1GALT1C1LP0DN25 315 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 SLC2A1P11166 492 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 TNFRSF1BP20333 461 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 RAB5AP20339 215 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 RPL3P39023 403 aaKnown RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 LUMP51884 338 aaPredicted RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 CDH12P55289 794 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 STXBP1P61764 594 aaKnown RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 RPL38P63173 70 aaKnown RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 BCL2L1Q07817 233 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 SF1Q15637 639 aaKnown RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 VMACQ2NL98 169 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 TTLL9Q3SXZ7 439 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 RNASE10Q5GAN6 216 aaKnown RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF667Q5HYK9 610 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 LRIF1Q5T3J3 769 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 ZBTB8OSQ8IWT0 167 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 DNAAF1Q8NEP3 725 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 OR52B6Q8NGF0 335 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 MAFIPQ8WZ33 124 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 FOXRED1Q96CU9 486 aaPredicted RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 TCTN2Q96GX1 697 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 DPH2Q9BQC3 489 aaPredicted RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 NDUFAF3Q9BU61 184 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 BCO2Q9BYV7 579 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 HMX1Q9NP08 348 aaPredicted RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 TREM1Q9NP99 234 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 GRHPRQ9UBQ7 328 aa7.32□□□□□ -1.24
COL4A5-205ENST00000483338 AAR2Q9Y312 384 aaKnown RBP7.32□□□□□ -1.24
COL4A5-205ENST00000483338 GSAPA4D1B5 854 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms