RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 STK38LQ9Y2H1 464 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 FIS1Q9Y3D6 152 aa12.41□□□□□ -0.42
VARS-226ENST00000483275 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 A0A1W2PPM1 405 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 CCDC151A5D8V7 595 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 ALG1L2C9J202 215 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 SEC22BO75396 215 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 RSL1D1O76021 490 aaKnown RBP12.4□□□□□ -0.42
VARS-226ENST00000483275 SLITRK5O94991 958 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 KCNK2O95069 426 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 SOD3P08294 240 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 MYL2P10916 166 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 PRPS2P11908 318 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 GSTM5P46439 218 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 PSMD4P55036 377 aaKnown RBP12.4□□□□□ -0.42
VARS-226ENST00000483275 FAPQ12884 760 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 SLC29A2Q14542 456 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 NDUFAF6Q330K2 333 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 ZYG11AQ6WRX3 759 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 FRMD7Q6ZUT3 714 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 NUFIP2Q7Z417 695 aaKnown RBP12.4□□□□□ -0.42
VARS-226ENST00000483275 GSPT2Q8IYD1 628 aaKnown RBP12.4□□□□□ -0.42
VARS-226ENST00000483275 ZNF611Q8N823 705 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 ATP6V1C2Q8NEY4 427 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 NUP43Q8NFH3 380 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 OR2T11Q8NH01 316 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 GIMAP5Q96F15 307 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 TMEM204Q9BSN7 226 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 GIN1Q9NXP7 522 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 BAIAP2L1Q9UHR4 511 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 CCL27Q9Y4X3 112 aa12.4□□□□□ -0.42
VARS-226ENST00000483275 ALPK2Q86TB3 2170 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 IGHV3-15A0A0B4J1V0 119 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 SERTM1A2A2V5 107 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 ADAMDEC1O15204 470 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 RIPK2O43353 540 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 NDUFS7O75251 213 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 NKX2-2O95096 273 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 PROCP04070 461 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 TUBBP07437 444 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 GSTA1P08263 222 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 ABHD2P08910 425 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 FAM153BP0C7A2 387 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 PAX1P15863 534 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 PPP3CBP16298 524 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 SDC1P18827 310 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 ME2P23368 584 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 MAP3K8P41279 467 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 RPS4XP62701 263 aaKnown RBP12.39□□□□□ -0.43
VARS-226ENST00000483275 ZNF239Q16600 458 aaKnown RBP12.39□□□□□ -0.43
VARS-226ENST00000483275 CLEC12BQ2HXU8 276 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 FAM153CQ494X1 144 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 TFAP2EQ6VUC0 442 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 BEND4Q6ZU67 534 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 IKBIPQ70UQ0 350 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.39□□□□□ -0.43
VARS-226ENST00000483275 TRIM46Q7Z4K8 759 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 KBTBD8Q8NFY9 601 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 MZB1Q8WU39 189 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 HOXB13Q92826 284 aaPredicted RBP12.39□□□□□ -0.43
VARS-226ENST00000483275 OSTF1Q92882 214 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 MS4A4EQ96PG1 132 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 C3orf14Q9HBI5 128 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 GIMAP2Q9UG22 337 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 RNF115Q9Y4L5 304 aa12.39□□□□□ -0.43
VARS-226ENST00000483275 MAGED1Q9Y5V3 778 aaPredicted RBP12.39□□□□□ -0.43
VARS-226ENST00000483275 A0A087WZY1 265 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 EFNA2O43921 213 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 CRLF1O75462 422 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 GCM2O75603 506 aaPredicted RBP12.38□□□□□ -0.43
VARS-226ENST00000483275 SOX30O94993 753 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 PSMB1P20618 241 aaKnown RBP12.38□□□□□ -0.43
VARS-226ENST00000483275 PTNP21246 168 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 ACVR1BP36896 505 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 RAC1P63000 192 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 RPL38P63173 70 aaKnown RBP12.38□□□□□ -0.43
VARS-226ENST00000483275 OCRLQ01968 901 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 ZNF117Q03924 483 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 DMTNQ08495 405 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 KIAA0040Q15053 153 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 CFAP157Q5JU67 520 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 ADAM5Q6NVV9 412 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 ESPNLQ6ZVH7 1005 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 STK32CQ86UX6 486 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 TUSC5Q8IXB3 177 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 LILRA2Q8N149 483 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 COX18Q8N8Q8 333 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 CDRT4Q8N9R6 151 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 RNF128Q8TEB7 428 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 CDS1Q92903 461 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 ZBTB8AQ96BR9 441 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 ZNF524Q96C55 264 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 PPCDCQ96CD2 204 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 CHMP6Q96FZ7 201 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 KLHL15Q96M94 604 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 TACO1Q9BSH4 297 aaKnown RBP12.38□□□□□ -0.43
VARS-226ENST00000483275 L2HGDHQ9H9P8 463 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 LRTM1Q9HBL6 345 aa12.38□□□□□ -0.43
VARS-226ENST00000483275 RRAGDQ9NQL2 400 aaPredicted RBP12.38□□□□□ -0.43
VARS-226ENST00000483275 SH3BP4Q9P0V3 963 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms