RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 NPAS1Q99742 590 aa8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 KLHDC3Q9BQ90 382 aa8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 BHLHE41Q9C0J9 482 aaPredicted RBP8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 C20orf27Q9GZN8 174 aa8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 CXorf36Q9H7Y0 433 aa8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 MED4Q9NPJ6 270 aa8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 EQTNQ9NQ60 294 aa8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 PLSCR4Q9NRQ2 329 aa8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 CCM2LQ9NUG4 571 aaPredicted RBP8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 ELOVL5Q9NYP7 299 aa8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 EDARQ9UNE0 448 aa8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.74□□□□□ -1.01
TMEM39A-207ENST00000482162 ROS1P08922 2347 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 ETV2O00321 342 aaPredicted RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 ANKRD28O15084 1053 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 EFNA2O43921 213 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 DNAJA2O60884 412 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 SCN2BO60939 215 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 SASH3O75995 380 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 AQP8O94778 261 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 SNUPNO95149 360 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 NTN1O95631 604 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 SERPINE1P05121 402 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 GUSBP08236 651 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 G6PDP11413 515 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 EFNA1P20827 205 aaPredicted RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 TCEA1P23193 301 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 CCT3P49368 545 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 RAC1P63000 192 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 FAM27E3Q08E93 113 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 CD226Q15762 336 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 LSM12Q3MHD2 195 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 VWA1Q6PCB0 445 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 FIGNL1Q6PIW4 674 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 PAMR1Q6UXH9 720 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 FAM214BQ7L5A3 538 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 MTERF4Q7Z6M4 381 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 LUZP2Q86TE4 346 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 NUDCD3Q8IVD9 361 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 UBQLNLQ8IYU4 475 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 LRRC34Q8IZ02 419 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 OR8J2Q8NGG1 315 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 AGR3Q8TD06 166 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 SFXN5Q8TD22 340 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 SLC9A6Q92581 669 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 ZBTB8AQ96BR9 441 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 ZNF845Q96IR2 970 aaPredicted RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 ALPK1Q96QP1 1244 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 PRPF18Q99633 342 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 ACTRT3Q9BYD9 372 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 HOXD1Q9GZZ0 328 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 CENPHQ9H3R5 247 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 ZNF395Q9H8N7 513 aaPredicted RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 ZCCHC3Q9NUD5 404 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 MED17Q9NVC6 651 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 ATAD3AQ9NVI7 634 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 PAQR5Q9NXK6 330 aaPredicted RBP8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 ICAM5Q9UMF0 924 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 TESMINQ9Y4I5 508 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 ACTL7BQ9Y614 415 aa8.73□□□□□ -1.01
TMEM39A-207ENST00000482162 SH3D21A4FU49 640 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 DEFB108AA8MXU0 73 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 HMGB1P1B2RPK0 211 aaPredicted RBP8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 SHISA8B8ZZ34 492 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 H3BML4 177 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 TM9SF1O15321 606 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 SIAH2O43255 324 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 ATE1O95260 518 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 C6orf47O95873 294 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 KRT16P08779 473 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 ADH6P28332 368 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 CCKARP32238 428 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 UGT2B10P36537 528 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 CD79BP40259 229 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 SLC6A8P48029 635 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 RFX3P48380 749 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 RPS3AP61247 264 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 HBA1P69905 142 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 PHC1P78364 1004 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 POU6F2P78424 691 aaPredicted RBP8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 LASP1Q14847 261 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 PON3Q15166 354 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 CCNJQ5T5M9 372 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 AGBL2Q5U5Z8 902 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 CHMP1BQ7LBR1 199 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 GALNT10Q86SR1 603 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 TGIF2LYQ8IUE0 185 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 WDR75Q8IWA0 830 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 COX18Q8N8Q8 333 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 ZNF610Q8N9Z0 462 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 FNDC5Q8NAU1 212 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 CHDHQ8NE62 594 aaPredicted RBP8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 OR56A1Q8NGH5 318 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 MIPOL1Q8TD10 442 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 CDS1Q92903 461 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 MOAP1Q96BY2 351 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 ZNF524Q96C55 264 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 TUBGCP3Q96CW5 907 aa8.72□□□□□ -1.01
TMEM39A-207ENST00000482162 ARSGQ96EG1 525 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms