RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 WRAP73Q9P2S5 460 aaPredicted RBP4.11□□□□□ -1.75
UPF3B-203ENST00000478840 CDH9Q9ULB4 789 aa4.11□□□□□ -1.75
UPF3B-203ENST00000478840 USP6P35125 1406 aa4.11□□□□□ -1.75
UPF3B-203ENST00000478840 ATP10AO60312 1499 aa4.11□□□□□ -1.75
UPF3B-203ENST00000478840 A0A1W2PPR1 153 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 TRABD2BA6NFA1 517 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 FAM220BPB1ANY3 271 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 SRPX2O60687 465 aaPredicted RBP4.1□□□□□ -1.75
UPF3B-203ENST00000478840 IGKV3-20P01619 116 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 PNMTP11086 282 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 MMP11P24347 488 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 GDI1P31150 447 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 GNPDA1P46926 289 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 CCT3P49368 545 aaKnown RBP4.1□□□□□ -1.75
UPF3B-203ENST00000478840 BEX3Q00994 111 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 FGL1Q08830 312 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 ZNF154Q13106 437 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 C1orf61Q13536 156 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 MICAQ29983 383 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 TIGITQ495A1 244 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 SFT2D3Q587I9 215 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 PHYHD1Q5SRE7 291 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 ADAM5Q6NVV9 412 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 APTXQ7Z2E3 356 aaKnown RBP4.1□□□□□ -1.75
UPF3B-203ENST00000478840 Q8N377 158 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 OR9A4Q8NGU2 314 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 LRRC61Q9BV99 259 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 HCAR1Q9BXC0 346 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 OPN3Q9H1Y3 402 aaPredicted RBP4.1□□□□□ -1.75
UPF3B-203ENST00000478840 LRRN3Q9H3W5 708 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 PANK3Q9H999 370 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 TXLNGQ9NUQ3 528 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 SIGLEC8Q9NYZ4 499 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 LCMT1Q9UIC8 334 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 POLDIP2Q9Y2S7 368 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 OARD1Q9Y530 152 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 MAD1L1Q9Y6D9 718 aa4.1□□□□□ -1.75
UPF3B-203ENST00000478840 HELTA6NFD8 242 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 H7C423 109 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 NBR2O15453 112 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 CA1P00915 261 aaPredicted RBP4.09□□□□□ -1.75
UPF3B-203ENST00000478840 IGHG4P01861 327 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 RNF224P0DH78 156 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 CT45A10P0DMU9 189 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 SFTPCP11686 197 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 DPEP1P16444 411 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 PCMT1P22061 227 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 CD80P33681 288 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 ALDH3B2P48448 385 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 ERVK11-1P61568 191 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 CCNA1P78396 465 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 PAX8Q06710 450 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 IL18R1Q13478 541 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 CYLC2Q14093 348 aaPredicted RBP4.09□□□□□ -1.75
UPF3B-203ENST00000478840 LAGE3Q14657 143 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 NDUFA9Q16795 377 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 TMEM44Q2T9K0 475 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 WSCD1Q658N2 575 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 ZNF57Q68EA5 555 aaPredicted RBP4.09□□□□□ -1.75
UPF3B-203ENST00000478840 OR8G2PQ6IF36 304 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 CCBE1Q6UXH8 406 aaPredicted RBP4.09□□□□□ -1.75
UPF3B-203ENST00000478840 CCDC80Q76M96 950 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 TRPM8Q7Z2W7 1104 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 ZNF329Q86UD4 541 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 SERPINA9Q86WD7 417 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 ABHD12Q8N2K0 398 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 DHRSXQ8N5I4 330 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 TMEM80Q96HE8 168 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 CCDC77Q9BR77 488 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 NIPSNAP3BQ9BS92 247 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 TRIM51Q9BSJ1 452 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 PKIBQ9C010 78 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 ZBP1Q9H171 429 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 HEXA-AS1Q9H8Q6 139 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 SGK2Q9HBY8 427 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 MDFICQ9P1T7 246 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 SCML2Q9UQR0 700 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 USP16Q9Y5T5 823 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 NSD2O96028 1365 aa4.09□□□□□ -1.75
UPF3B-203ENST00000478840 NOTCH4Q99466 2003 aa4.09□□□□□ -1.76
UPF3B-203ENST00000478840 A0A1B0GTH9 108 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.08□□□□□ -1.76
UPF3B-203ENST00000478840 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.08□□□□□ -1.76
UPF3B-203ENST00000478840 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 SNTNA6NMZ2 147 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 ZNF487B1APH4 448 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 G3V4G9 280 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 SLC17A2O00624 439 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 LINC01565O15544 149 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 HPP00738 406 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 RENP00797 406 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 UMPSP11172 480 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 POU2F1P14859 743 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 ARHGDIBP52566 201 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 EFNB2P52799 333 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 OTUD4Q01804 1114 aaKnown RBP4.08□□□□□ -1.76
UPF3B-203ENST00000478840 CD300CQ08708 224 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 FCHO2Q0JRZ9 810 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 PEX6Q13608 980 aa4.08□□□□□ -1.76
UPF3B-203ENST00000478840 CNPY1Q3B7I2 92 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms