RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 MLKLQ8NB16 471 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 ZNF397Q8NF99 534 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 SSC4DQ8WTU2 575 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 CHPT1Q8WUD6 406 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 BADQ92934 168 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 NCLNQ969V3 563 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 SLC45A3Q96JT2 553 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 AGAP3Q96P47 875 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 TAAR1Q96RJ0 339 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 C19orf43Q9BQ61 176 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 RAB11FIP5Q9BXF6 653 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 Q9HAA7 133 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 POLE3Q9NRF9 147 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 NUDT4Q9NZJ9 180 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 BCAP29Q9UHQ4 241 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 SPATA2Q9UM82 520 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 NCOR1O75376 2440 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 OBSL1O75147 1896 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 KMT2EQ8IZD2 1858 aa3.26□□□□□ -1.89
CDC42BPA-212ENST00000478573 COL1A2P08123 1366 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 HELZP42694 1942 aaKnown RBP3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 MIA3Q5JRA6 1907 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 NUP210Q8TEM1 1887 aaPredicted RBP3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 KIF26AQ9ULI4 1882 aaPredicted RBP3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 IGHV3OR16-10A0A075B7F0 116 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 E9PMD0 336 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 SGK494L7N484 410 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 STK17BO94768 372 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 NDUFA7O95182 113 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 LGALS2P05162 132 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 CCDC159P0C7I6 412 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 ZCCHC18P0CG32 403 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 GATA1P15976 413 aaPredicted RBP3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 IL4RP24394 825 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 PRDX2P32119 198 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 ID1P41134 155 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 MATKP42679 507 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 NAPAP54920 295 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 PEX3P56589 373 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 ELAVL2Q12926 359 aaKnown RBP3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 CELF3Q5SZQ8 465 aaKnown RBP3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 ISLR2Q6UXK2 745 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 DPY19L2P2Q6ZN68 376 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 PAQR9Q6ZVX9 377 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 RUFY3Q7L099 469 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 GOLGA7Q7Z5G4 137 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 RPAINQ86UA6 219 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 VPS36Q86VN1 386 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 RNF130Q86XS8 419 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 BCORP1Q8N888 145 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 BANPQ8N9N5 519 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 RELL2Q8NC24 303 aaPredicted RBP3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 ZNRF1Q8ND25 227 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 NPRL2Q8WTW4 380 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 CRYGNQ8WXF5 182 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 RSPH1Q8WYR4 309 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 ANKRD27Q96NW4 1050 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 CPXM1Q96SM3 734 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 ATF6BQ99941 703 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 NLNQ9BYT8 704 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 CCSER1Q9C0I3 900 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 NT5DC2Q9H857 520 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 VAT1LQ9HCJ6 419 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 CTSZQ9UBR2 303 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 CIDEBQ9UHD4 219 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 RARRES3Q9UL19 164 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 UBIAD1Q9Y5Z9 338 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 CHD7Q9P2D1 2997 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 LAMA2P24043 3122 aaKnown RBP3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 CHD9Q3L8U1 2897 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 PTPRDP23468 1912 aa3.25□□□□□ -1.89
CDC42BPA-212ENST00000478573 DOCK8Q8NF50 2099 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 IGSF9BQ9UPX0 1349 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 CROCCQ5TZA2 2017 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 MYH10P35580 1976 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 LAMA3Q16787 3333 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 TRGV8A0A0C4DH27 118 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 RNF212BA8MTL3 300 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 DEXIO95424 95 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 HPRP00739 348 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 ZNF286BP0CG31 522 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 ACADSP16219 412 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 PTPN6P29350 595 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 GNA11P29992 359 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 PGFP49763 221 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 SLC26A2P50443 739 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 SGSHP51688 502 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 NDUFV3P56181 108 aaKnown RBP3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 NAAAQ02083 359 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 PDZK1IP1Q13113 114 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 SCGB2A2Q13296 93 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 BTG3Q14201 252 aaPredicted RBP3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 EMC2Q15006 297 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 SHHQ15465 462 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 UBE2SQ16763 222 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 ZNF699Q32M78 642 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 HSDL1Q3SXM5 330 aa3.24□□□□□ -1.89
CDC42BPA-212ENST00000478573 UNC50Q53HI1 259 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms