RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 A0A1B0GTL3 188 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 SH3PXD2BA1X283 911 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 GYPBP06028 91 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 ZNF43P17038 809 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 GNG2P59768 71 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 PRAMEF8Q5VWM4 474 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 PRAMEF7Q5VXH5 474 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 TECPR1Q7Z6L1 1165 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 NXPE2Q96DL1 559 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 NEURL3Q96EH8 262 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 UBQLN4Q9NRR5 601 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 ZNF443Q9Y2A4 671 aaPredicted RBP13.31□□□□□ -0.28
NPHP4-208ENST00000478423 XIRP1Q702N8 1843 aaKnown RBP13.31□□□□□ -0.28
NPHP4-208ENST00000478423 PLOD2O00469 737 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 TSPAN12O95859 305 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 SLC19A1P41440 591 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 SLC6A8P48029 635 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 ZNF750Q32MQ0 723 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 ABCA11PQ4W5N1 156 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 TMEM69Q5SWH9 247 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 OR5M10Q6IEU7 315 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 OR51Q1Q8NH59 317 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 PTRH2Q9Y3E5 179 aaKnown RBP13.31□□□□□ -0.28
NPHP4-208ENST00000478423 DOCK3Q8IZD9 2030 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 TRAV27A0A087WT01 109 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 TPD52L2O43399 206 aaKnown RBP13.31□□□□□ -0.28
NPHP4-208ENST00000478423 CDK1P06493 297 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 PPP5CP53041 499 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 OR1Q1Q15612 314 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 GPR19Q15760 415 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 PYCR3Q53H96 274 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 ZNF595Q8IYB9 648 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 SLC15A4Q8N697 577 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 DDX31Q9H8H2 851 aaKnown RBP13.31□□□□□ -0.28
NPHP4-208ENST00000478423 TRPV4Q9HBA0 871 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 HHATLQ9HCP6 504 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 ASIC5Q9NY37 505 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 DHCR7Q9UBM7 475 aaKnown RBP13.31□□□□□ -0.28
NPHP4-208ENST00000478423 ZNF69Q9UC07 566 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 SIT1Q9Y3P8 196 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 TNFRSF10CO14798 259 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 MRPS14O60783 128 aaKnown RBP13.31□□□□□ -0.28
NPHP4-208ENST00000478423 RBBP9O75884 186 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 RGS9O75916 674 aaPredicted RBP13.31□□□□□ -0.28
NPHP4-208ENST00000478423 PKLRP30613 574 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 ERVK-25P63136 954 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 MAB21L1Q13394 359 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 TP53I3Q53FA7 332 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 LRIF1Q5T3J3 769 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 EEF1A1P5Q5VTE0 462 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 CCBE1Q6UXH8 406 aaPredicted RBP13.31□□□□□ -0.28
NPHP4-208ENST00000478423 GDPGP1Q6ZNW5 385 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 OLIG3Q7RTU3 272 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 PPP1R3BQ86XI6 285 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 COQ10AQ96MF6 247 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 FGF21Q9NSA1 209 aa13.31□□□□□ -0.28
NPHP4-208ENST00000478423 CTSLP07711 333 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 RAB3BP20337 219 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 DAPP51397 102 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 RAB38P57729 211 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 TBC1D25Q3MII6 688 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 FAM83HQ6ZRV2 1179 aaPredicted RBP13.3□□□□□ -0.28
NPHP4-208ENST00000478423 B3GNT8Q7Z7M8 397 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 OR8S1Q8NH09 359 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 PATE1Q8WXA2 126 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 C1QTNF2Q9BXJ5 285 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 C6orf106Q9H6K1 298 aaPredicted RBP13.3□□□□□ -0.28
NPHP4-208ENST00000478423 RLIMQ9NVW2 624 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 UCKL1Q9NWZ5 548 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 SLC23A2Q9UGH3 650 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 ISPDA4D126 451 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 PRKYO43930 277 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 MAP2K3P46734 347 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 AFF3P51826 1226 aaKnown RBP13.3□□□□□ -0.28
NPHP4-208ENST00000478423 ZNF91Q05481 1191 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 GAB1Q13480 694 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 SLC48A1Q6P1K1 146 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 SLC16A11Q8NCK7 471 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 FAM174AQ8TBP5 190 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 FGF14Q92915 247 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 OR4K3Q96R72 315 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 VNN3Q9NY84 501 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 MMP17Q9ULZ9 603 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 RPH3AQ9Y2J0 694 aaPredicted RBP13.3□□□□□ -0.28
NPHP4-208ENST00000478423 A0A1W2PQL4 384 aaPredicted RBP13.3□□□□□ -0.28
NPHP4-208ENST00000478423 KLK8O60259 260 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 ZNF432O94892 652 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 GASTP01350 101 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 MAS1P04201 325 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 YES1P07947 543 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 FRKP42685 505 aaPredicted RBP13.3□□□□□ -0.28
NPHP4-208ENST00000478423 ARHGDIBP52566 201 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 SLC18B1Q6NT16 456 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 TDHQ8IZJ6 230 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 FNDC8Q8TC99 324 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 CPNE2Q96FN4 548 aaPredicted RBP13.3□□□□□ -0.28
NPHP4-208ENST00000478423 PGAM5Q96HS1 289 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 C1GALT1Q9NS00 363 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 ENPP5Q9UJA9 477 aa13.3□□□□□ -0.28
NPHP4-208ENST00000478423 SCP2D1Q9UJQ7 156 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms