RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 KLHL15Q96M94 604 aa9.36□□□□□ -0.91
APTX-222ENST00000478279 RNF145Q96MT1 663 aa9.36□□□□□ -0.91
APTX-222ENST00000478279 NSUN5Q96P11 429 aaKnown RBP9.36□□□□□ -0.91
APTX-222ENST00000478279 GPR78Q96P69 363 aa9.36□□□□□ -0.91
APTX-222ENST00000478279 BBS4Q96RK4 519 aa9.36□□□□□ -0.91
APTX-222ENST00000478279 VPS29Q9UBQ0 182 aa9.36□□□□□ -0.91
APTX-222ENST00000478279 PCTPQ9UKL6 214 aa9.36□□□□□ -0.91
APTX-222ENST00000478279 C19orf53Q9UNZ5 99 aaPredicted RBP9.36□□□□□ -0.91
APTX-222ENST00000478279 MGAT4BQ9UQ53 548 aa9.36□□□□□ -0.91
APTX-222ENST00000478279 SNX24Q9Y343 169 aa9.36□□□□□ -0.91
APTX-222ENST00000478279 ARFGEF3Q5TH69 2177 aa9.36□□□□□ -0.91
APTX-222ENST00000478279 A0A1W2PRB8 838 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 VWC2LB2RUY7 222 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 ALG1L2C9J202 215 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 GSTA2P09210 222 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 COL6A2P12110 1019 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 BMP4P12644 408 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 FABP6P51161 128 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 ZNF41P51814 821 aaPredicted RBP9.35□□□□□ -0.91
APTX-222ENST00000478279 MANFP55145 182 aaKnown RBP9.35□□□□□ -0.91
APTX-222ENST00000478279 GGTLC2Q14390 218 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 ZNHIT3Q15649 155 aaPredicted RBP9.35□□□□□ -0.91
APTX-222ENST00000478279 SLC22A25Q6T423 547 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 TMEM108Q6UXF1 575 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 FCRLAQ7L513 359 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 LILRA2Q8N149 483 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 CDYL2Q8N8U2 506 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 POC1BQ8TC44 478 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 CPNE4Q96A23 557 aaPredicted RBP9.35□□□□□ -0.91
APTX-222ENST00000478279 LMF2Q9BU23 707 aaKnown RBP9.35□□□□□ -0.91
APTX-222ENST00000478279 PRR14Q9BWN1 585 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 SRXN1Q9BYN0 137 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 SHCBP1LQ9BZQ2 653 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 C12orf65Q9H3J6 166 aaKnown RBP9.35□□□□□ -0.91
APTX-222ENST00000478279 C3orf14Q9HBI5 128 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 MED17Q9NVC6 651 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 POU2F3Q9UKI9 436 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 SNX6Q9UNH7 406 aa9.35□□□□□ -0.91
APTX-222ENST00000478279 A0A096LPK6 155 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 GNG14A0A1W2PPG7 69 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 MYO1GB0I1T2 1018 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 STX16-NPEPL1H3BU86 382 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 NDUFS8O00217 210 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 UPK1AO00322 258 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 STX16O14662 325 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 PCDH7O60245 1069 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 SLITRK5O94991 958 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 KCNH1O95259 989 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 PGM3O95394 542 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 PSMG1O95456 288 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 TGFAP01135 160 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 IGKV1D-16P01601 117 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 JUNP05412 331 aaKnown RBP9.34□□□□□ -0.91
APTX-222ENST00000478279 DHRS4L1P0CG22 281 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 APEHP13798 732 aaKnown RBP9.34□□□□□ -0.91
APTX-222ENST00000478279 ITGA2P17301 1181 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 GGT1P19440 569 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 PTAFRP25105 342 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 SHC1P29353 583 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 SFTPDP35247 375 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 NR4A2P43354 598 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 OR3A2P47893 321 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 PDLIM4P50479 330 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 RAE1P78406 368 aaKnown RBP9.34□□□□□ -0.91
APTX-222ENST00000478279 CHRNB3Q05901 458 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 SLC18A2Q05940 514 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 NAB1Q13506 487 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 CR1LQ2VPA4 569 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 TECRLQ5HYJ1 363 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 ZNF544Q6NX49 715 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 LETMD1Q6P1Q0 360 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 TMEM107Q6UX40 140 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 GAS2L3Q86XJ1 694 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 LRRC8AQ8IWT6 810 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 DEPDC4Q8N2C3 294 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 SLC43A2Q8N370 569 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.34□□□□□ -0.91
APTX-222ENST00000478279 OR2W6PQ8NHA6 318 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 C16orf78Q8WTQ4 265 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 ZMYND19Q96E35 227 aaPredicted RBP9.34□□□□□ -0.91
APTX-222ENST00000478279 BCO1Q9HAY6 547 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 DMGDHQ9UI17 866 aaKnown RBP9.34□□□□□ -0.91
APTX-222ENST00000478279 PRSS50Q9UI38 385 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 TMCO1Q9UM00 188 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 NFU1Q9UMS0 254 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 PMF1-BGLAPU3KQ54 211 aa9.34□□□□□ -0.91
APTX-222ENST00000478279 IGHV4-61A0A0C4DH41 118 aa9.33□□□□□ -0.92
APTX-222ENST00000478279 GXYLT2A0PJZ3 443 aa9.33□□□□□ -0.92
APTX-222ENST00000478279 OR5H1A6NKK0 313 aa9.33□□□□□ -0.92
APTX-222ENST00000478279 TTC36A6NLP5 189 aa9.33□□□□□ -0.92
APTX-222ENST00000478279 PPP6CO00743 305 aa9.33□□□□□ -0.92
APTX-222ENST00000478279 LY6HO94772 140 aa9.33□□□□□ -0.92
APTX-222ENST00000478279 OXSR1O95747 527 aaPredicted RBP9.33□□□□□ -0.92
APTX-222ENST00000478279 OTCP00480 354 aa9.33□□□□□ -0.92
APTX-222ENST00000478279 NGFRP08138 427 aa9.33□□□□□ -0.92
APTX-222ENST00000478279 LINGO3P0C6S8 592 aa9.33□□□□□ -0.92
APTX-222ENST00000478279 HSD3B1P14060 373 aa9.33□□□□□ -0.92
APTX-222ENST00000478279 TCP1P17987 556 aaKnown RBP9.33□□□□□ -0.92
APTX-222ENST00000478279 EGR1P18146 543 aa9.33□□□□□ -0.92
APTX-222ENST00000478279 COX5AP20674 150 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms