RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 ZNF155Q12901 538 aaPredicted RBP9.12□□□□□ -0.95
CMC1-209ENST00000477739 EIF4HQ15056 248 aaKnown RBP9.12□□□□□ -0.95
CMC1-209ENST00000477739 TRMT12Q53H54 448 aaKnown RBP9.12□□□□□ -0.95
CMC1-209ENST00000477739 MZT2AQ6P582 158 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 CDK20Q8IZL9 346 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 SIRT6Q8N6T7 355 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 PROKR2Q8NFJ6 384 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 OR2T35Q8NGX2 323 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 OR2L2Q8NH16 312 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 FANK1Q8TC84 345 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 SLC25A46Q96AG3 418 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 VOPP1Q96AW1 172 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 METTL2AQ96IZ6 378 aaKnown RBP9.12□□□□□ -0.95
CMC1-209ENST00000477739 KXD1Q9BQD3 176 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 FUZQ9BT04 418 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 SPATA9Q9BWV2 254 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 CACNG6Q9BXT2 260 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 CHST8Q9H2A9 424 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 NEUROD4Q9HD90 331 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 FBXL3Q9UKT7 428 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 CACNA1EQ15878 2313 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 NPC1O15118 1278 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 TP53P04637 393 aaPredicted RBP9.12□□□□□ -0.95
CMC1-209ENST00000477739 HNRNPA1P09651 372 aaKnown RBP eCLIP9.12□□□□□ -0.95
CMC1-209ENST00000477739 KCNJ5P48544 419 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 KHKP50053 298 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 RAB14P61106 215 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 FAPQ12884 760 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 NDUFAF7Q7L592 441 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 DNAAF1Q8NEP3 725 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 OR52E2Q8NGJ4 325 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 TRIM63Q969Q1 353 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 CXorf40BQ96DE9 158 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 CHFRQ96EP1 664 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 CNRIP1Q96F85 164 aaPredicted RBP9.12□□□□□ -0.95
CMC1-209ENST00000477739 COQ10AQ96MF6 247 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 AMDHD1Q96NU7 426 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 OR7D2Q96RA2 312 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 THAP7Q9BT49 309 aaPredicted RBP9.12□□□□□ -0.95
CMC1-209ENST00000477739 ZMAT3Q9HA38 289 aaKnown RBP9.12□□□□□ -0.95
CMC1-209ENST00000477739 MYNNQ9NPC7 610 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 ZNF69Q9UC07 566 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 ING1Q9UK53 422 aaPredicted RBP9.12□□□□□ -0.95
CMC1-209ENST00000477739 CDV3Q9UKY7 258 aaKnown RBP9.12□□□□□ -0.95
CMC1-209ENST00000477739 A4GNTQ9UNA3 340 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 OR10H1Q9Y4A9 318 aa9.12□□□□□ -0.95
CMC1-209ENST00000477739 SH3D21A4FU49 640 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 FOXE1O00358 373 aaPredicted RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 CDC42EP2O14613 210 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 PRICKLE3O43900 615 aaPredicted RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 CRYZL1O95825 349 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 DHFRP00374 187 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 ZNF888P0CJ79 500 aaPredicted RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 GABRA3P34903 492 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 MPIP34949 423 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 IFNGR2P38484 337 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 BCL6P41182 706 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 FAM78AQ5JUQ0 283 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 KANSL1Q7Z3B3 1105 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 C7orf61Q8IZ16 206 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 OR4D9Q8NGE8 314 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 OR4C6Q8NH72 309 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 RFT1Q96AA3 541 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 SLC41A3Q96GZ6 507 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 TSSK2Q96PF2 358 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 ERMAPQ96PL5 475 aaPredicted RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 CCDC32Q9BV29 185 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 C3orf14Q9HBI5 128 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 SRA1Q9HD15 236 aaKnown RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 C20orf141Q9NUB4 165 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 RDH8Q9NYR8 311 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 PLEKHB1Q9UF11 243 aaPredicted RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 NDOR1Q9UHB4 597 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 ING4Q9UNL4 249 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 FXYD6-FXYD2A0A087WZ82 144 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 TEX13CA0A0J9YWL9 993 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 HMX3A6NHT5 357 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 PRODHO43272 600 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 VEGFDO43915 354 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 UBXN7O94888 489 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 EIF4EP06730 217 aaKnown RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 ST3GAL3Q11203 375 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 ILKQ13418 452 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 ADAM15Q13444 863 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 PDGFRLQ15198 375 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 YOD1Q5VVQ6 348 aaPredicted RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 SLX4IPQ5VYV7 408 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 PRSS41Q7RTY9 318 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 OR4Q3Q8NH05 313 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 FXYD6Q9H0Q3 95 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 DPEP2Q9H4A9 486 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 AUNIPQ9H7T9 357 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 FKRPQ9H9S5 495 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 SLC28A3Q9HAS3 691 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 PLXND1Q9Y4D7 1925 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 RGS11O94810 467 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 MAS1P04201 325 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 CISD3P0C7P0 127 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 CXCL3P19876 107 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 EDNRAP25101 427 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms