RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 C10orf71Q711Q0 1435 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 STK17BO94768 372 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 ITGB7P26010 798 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 GABRA2P47869 451 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 GPR50Q13585 617 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 PLCXD3Q63HM9 321 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 TMEM135Q86UB9 458 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 MCATQ8IVS2 390 aaKnown RBP17.5■□□□□ 0.39
VARS2-209ENST00000477288 NAGSQ8N159 534 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 FUNDC2Q9BWH2 189 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 SORBS1Q9BX66 1292 aaKnown RBP17.5■□□□□ 0.39
VARS2-209ENST00000477288 TMEM45AQ9NWC5 275 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 IER3IP1Q9Y5U9 82 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 ZNF142P52746 1687 aaPredicted RBP17.5■□□□□ 0.39
VARS2-209ENST00000477288 LILRB3O75022 631 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 SLC22A5O76082 557 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 HTR6P50406 440 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 BMXP51813 675 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 PDZD3Q86UT5 571 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 TCEAL8Q8IYN2 117 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 OR52E1Q8NGJ3 308 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 OR5D16Q8NGK9 328 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 COG8Q96MW5 612 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 ENKD1Q9H0I2 346 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 ACOT13Q9NPJ3 140 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 A0A087WUU8 490 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 UGT2B7P16662 529 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 IRF4Q15306 451 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 RGNQ15493 299 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 LRRTM3Q86VH5 581 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 BPHLQ86WA6 291 aaPredicted RBP17.5■□□□□ 0.39
VARS2-209ENST00000477288 MINDY1Q8N5J2 469 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 EID2Q8N6I1 236 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 FOXN4Q96NZ1 517 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 SPO11Q9Y5K1 396 aa17.5■□□□□ 0.39
VARS2-209ENST00000477288 CSNK1A1P48729 337 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 DEFB103AP81534 67 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 P2RY14Q15391 338 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 LCN10Q6JVE6 187 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 TBC1D20Q96BZ9 403 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 UBXN10Q96LJ8 280 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 RABL2AQ9UBK7 228 aaPredicted RBP17.49■□□□□ 0.39
VARS2-209ENST00000477288 RABL2BQ9UNT1 228 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 F5H5P2 479 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 ARPC5O15511 151 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 HSD11B1LQ7Z5J1 315 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 CHRDQ9H2X0 955 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 TESQ9UGI8 421 aaKnown RBP17.49■□□□□ 0.39
VARS2-209ENST00000477288 SRPK3Q9UPE1 567 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 DNAJC15Q9Y5T4 150 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 A0A1W2PQL4 384 aaPredicted RBP17.49■□□□□ 0.39
VARS2-209ENST00000477288 GMDSO60547 372 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 OSMP13725 252 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 PSMB10P40306 273 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 NADSYN1Q6IA69 706 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 OR52R1Q8NGF1 315 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 HCAR1Q9BXC0 346 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 NDUFAF4Q9P032 175 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 RPH3ALQ9UNE2 315 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 TMX2-CTNND1H3BSU7 103 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 DVL2O14641 736 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 CBX7O95931 251 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 CAPNS1P04632 268 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 FUT1P19526 365 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 WDR5P61964 334 aaKnown RBP17.49■□□□□ 0.39
VARS2-209ENST00000477288 NFATC4Q14934 902 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 OR52W1Q6IF63 320 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 TMEM184AQ6ZMB5 413 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 CPOQ8IVL8 374 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 LMO3Q8TAP4 145 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 BORCS6Q96GS4 357 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 FKRPQ9H9S5 495 aa17.49■□□□□ 0.39
VARS2-209ENST00000477288 TEX10Q9NXF1 929 aaPredicted RBP17.49■□□□□ 0.39
VARS2-209ENST00000477288 LIPCP11150 499 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 SAT2Q96F10 170 aaPredicted RBP17.48■□□□□ 0.39
VARS2-209ENST00000477288 OR10A5Q9H207 317 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 OR10A2Q9H208 303 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 GHRLQ9UBU3 117 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 POLHQ9Y253 713 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 CSNK1G3Q9Y6M4 447 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 RETP07949 1114 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 CD6P30203 668 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 C9orf135Q5VTT2 229 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 SLC22A10Q63ZE4 541 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 RBM12BQ8IXT5 1001 aaKnown RBP17.48■□□□□ 0.39
VARS2-209ENST00000477288 KDM1BQ8NB78 822 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 IL17RDQ8NFM7 739 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 OBP2BQ9NPH6 170 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 SLAMF7Q9NQ25 335 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 M0QZQ0 153 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 FRS3O43559 492 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 RAB3DO95716 219 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 WDPCPO95876 746 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 KIR2DS3Q14952 304 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 RELL1Q8IUW5 271 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 SNX18Q96RF0 628 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 SPIN2AQ99865 258 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 SPIN2BQ9BPZ2 258 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 SMIM3Q9BZL3 60 aa17.48■□□□□ 0.39
VARS2-209ENST00000477288 RPS10P5Q9NQ39 176 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms