RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 HSP90B2PQ58FF3 399 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 HIST2H2BCQ6DN03 193 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 ARSKQ6UWY0 536 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 SEM1Q6ZVN7 128 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 C16orf62Q7Z3J2 963 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 ITCHQ96J02 903 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 ZNF350Q9GZX5 532 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 RUBCNLQ9H714 662 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 KCNJ16Q9NPI9 418 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 STOML1Q9UBI4 398 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 Q9UFV3 132 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 LIPT1Q9Y234 373 aa12.16□□□□□ -0.46
ACTN4-205ENST00000477174 NCKAP5O14513 1909 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 C7orf72A4D263 438 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 H0Y3Z8 333 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 GTPBP1O00178 669 aaKnown RBP12.15□□□□□ -0.46
ACTN4-205ENST00000477174 HNRNPRO43390 633 aaKnown RBP12.15□□□□□ -0.46
ACTN4-205ENST00000477174 ATP8B1O43520 1251 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 HCRTR2O43614 444 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 EDF1O60869 148 aaKnown RBP12.15□□□□□ -0.46
ACTN4-205ENST00000477174 TOXO94900 526 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 IL2RAP01589 272 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 GSNP06396 782 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 GRNP28799 593 aaKnown RBP12.15□□□□□ -0.46
ACTN4-205ENST00000477174 ADH7P40394 386 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 CDKN2CP42773 168 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 KHKP50053 298 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 CASP9P55211 416 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 CLDN18P56856 261 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 SRYQ05066 204 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 CD226Q15762 336 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 ZNF141Q15928 474 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 TMEM44Q2T9K0 475 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 RAET1LQ5VY80 246 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 TNFAIP8L2Q6P589 184 aaPredicted RBP12.15□□□□□ -0.46
ACTN4-205ENST00000477174 ADGRE4PQ86SQ3 457 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 RNF130Q86XS8 419 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 GATSQ8NAP1 163 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 OR9I1Q8NGQ6 314 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 B4GALNT2Q8NHY0 566 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 PHOSPHO1Q8TCT1 267 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 PMM1Q92871 262 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 RAB8BQ92930 207 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 WNT2BQ93097 391 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 ZBTB8AQ96BR9 441 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 ROPN1LQ96C74 230 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 TRIB1Q96RU8 372 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 SAP130Q9H0E3 1048 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 RABEP2Q9H5N1 569 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 MED4Q9NPJ6 270 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 ZNF629Q9UEG4 869 aaPredicted RBP12.15□□□□□ -0.46
ACTN4-205ENST00000477174 ZNF337Q9Y3M9 751 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 AP4B1Q9Y6B7 739 aa12.15□□□□□ -0.46
ACTN4-205ENST00000477174 MED12Q93074 2177 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 OR2M5A3KFT3 312 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 MBD3L4A6NDZ8 208 aaPredicted RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 MBD3L3A6NE82 208 aaPredicted RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 SERINC4A6NH21 518 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 MBD3L5A6NJ08 208 aaPredicted RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 HMGN4O00479 90 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 EIF4E2O60573 245 aaKnown RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 ANP32DO95626 131 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 ZNF17P17021 662 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 POU3F2P20265 443 aaPredicted RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 TCEA1P23193 301 aaKnown RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 EIF1P41567 113 aaKnown RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 ATP4BP51164 291 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 P2RX1P51575 399 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 ZNF41P51814 821 aaPredicted RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 SUMO3P55854 103 aaPredicted RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 GPR68Q15743 365 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 SLC25A35Q3KQZ1 300 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 TIGD2Q4W5G0 525 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.14□□□□□ -0.472e-8■■■■□ 23.8
ACTN4-205ENST00000477174 METTL21CQ5VZV1 264 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 BLOC1S3Q6QNY0 202 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 CHMP1BQ7LBR1 199 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 GTPBP8Q8N3Z3 284 aaPredicted RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 MEIOBQ8N635 442 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 TNIP2Q8NFZ5 429 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 MBD3L2Q8NHZ7 208 aaPredicted RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 ZFP90Q8TF47 636 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 GTF2H4Q92759 462 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 VPS33AQ96AX1 596 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 SH3YL1Q96HL8 342 aaPredicted RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 TRNT1Q96Q11 434 aaKnown RBP12.14□□□□□ -0.47
ACTN4-205ENST00000477174 TM9SF2Q99805 663 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 TUBA1CQ9BQE3 449 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 MED17Q9NVC6 651 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 MKLN1Q9UL63 735 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 ICAM5Q9UMF0 924 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 TRIM33Q9UPN9 1127 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 WDR45Q9Y484 360 aa12.14□□□□□ -0.47
ACTN4-205ENST00000477174 UQCRHLA0A096LP55 91 aa12.13□□□□□ -0.47
ACTN4-205ENST00000477174 NPIPA5A0A0B4J1W7 369 aa12.13□□□□□ -0.47
ACTN4-205ENST00000477174 NPIPA7E9PJI5 369 aa12.13□□□□□ -0.47
ACTN4-205ENST00000477174 ZNF264O43296 627 aa12.13□□□□□ -0.47
ACTN4-205ENST00000477174 GMFGO60234 142 aa12.13□□□□□ -0.47
ACTN4-205ENST00000477174 UGT2B17O75795 530 aa12.13□□□□□ -0.47
ACTN4-205ENST00000477174 NPIPA8P0DM63 369 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms