RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 KIF17Q9P2E2 1029 aa13.3□□□□□ -0.28
COL4A6-206ENST00000477085 HS3ST3B1Q9Y662 390 aa13.3□□□□□ -0.28
COL4A6-206ENST00000477085 ZFHX2Q9C0A1 2572 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-206ENST00000477085 FAAHO00519 579 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 AP3D1O14617 1153 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 OIP5O43482 229 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 ICOSLGO75144 302 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 OXSR1O95747 527 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-206ENST00000477085 ITGAMP11215 1152 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 ANXA8P13928 327 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 RAD23AP54725 363 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 SMIM11AP58511 58 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 TARDBPQ13148 414 aaKnown RBP eCLIP13.29□□□□□ -0.28
COL4A6-206ENST00000477085 OR1Q1Q15612 314 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 RFX4Q33E94 735 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 HLA-DQA1Q5Y7H0 255 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 KIRREL2Q6UWL6 708 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 WDR88Q6ZMY6 472 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 ZER1Q7Z7L7 766 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 MEX3DQ86XN8 651 aaKnown RBP13.29□□□□□ -0.28
COL4A6-206ENST00000477085 CCDC71Q8IV32 467 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-206ENST00000477085 CT55Q8WUE5 264 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 OMA1Q96E52 524 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 VMP1Q96GC9 406 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 SLC41A3Q96GZ6 507 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 KLHDC3Q9BQ90 382 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 PRSS27Q9BQR3 290 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 GABARAPL3Q9BY60 117 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 PAPOLBQ9NRJ5 636 aaKnown RBP13.29□□□□□ -0.28
COL4A6-206ENST00000477085 UBQLN4Q9NRR5 601 aa13.29□□□□□ -0.28
COL4A6-206ENST00000477085 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-206ENST00000477085 IGHV1-45A0A0A0MS14 117 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 TRBV11-1A0A0K0K1C0 115 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 C17orf51A8MQB3 221 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 MASP2O00187 686 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 TM4SF5O14894 197 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 REM1O75628 298 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 CELA2AP08217 269 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 COX6A1P12074 109 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 TCN2P20062 427 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 NPRL3Q12980 569 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 EIF3IQ13347 325 aaKnown RBP13.28□□□□□ -0.28
COL4A6-206ENST00000477085 LAIR2Q6ISS4 152 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 KLHL17Q6TDP4 642 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 PLEKHM3Q6ZWE6 761 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 ASCL5Q7RTU5 278 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 PRICKLE2Q7Z3G6 844 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 NLGN4XQ8N0W4 816 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 GATSQ8NAP1 163 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 WDR36Q8NI36 951 aaKnown RBP13.28□□□□□ -0.28
COL4A6-206ENST00000477085 TP53INP1Q96A56 240 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 ZNF524Q96C55 264 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 HSPBAP1Q96EW2 488 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 IMMP1LQ96LU5 166 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 REV1Q9UBZ9 1251 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 C19orf25Q9UFG5 118 aaPredicted RBP13.28□□□□□ -0.28
COL4A6-206ENST00000477085 NDRG4Q9ULP0 352 aaKnown RBP13.28□□□□□ -0.28
COL4A6-206ENST00000477085 TMCC3Q9ULS5 477 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 SLC7A7Q9UM01 511 aa13.28□□□□□ -0.28
COL4A6-206ENST00000477085 MAGEA13PA6NCF6 341 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 SOCS6O14544 535 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 ADAM10O14672 748 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 OR10H3O60404 316 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 UGT2B11O75310 529 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 OR5F1O95221 314 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 NADKO95544 446 aaPredicted RBP13.27□□□□□ -0.28
COL4A6-206ENST00000477085 IGFBP1P08833 259 aaPredicted RBP13.27□□□□□ -0.28
COL4A6-206ENST00000477085 TBXA2RP21731 343 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 F8A1P23610 371 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 MMP11P24347 488 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 PSMD4P55036 377 aaKnown RBP13.27□□□□□ -0.28
COL4A6-206ENST00000477085 ST3GAL3Q11203 375 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 EPS8Q12929 822 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 RAPSNQ13702 412 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 TRAM2Q15035 370 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 ZNF691Q5VV52 312 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 TTC23Q5W5X9 447 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 RANBP3LQ86VV4 465 aaPredicted RBP13.27□□□□□ -0.28
COL4A6-206ENST00000477085 SLC34A3Q8N130 599 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 OR4K5Q8NGD3 323 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 NUBPLQ8TB37 319 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 ELP5Q8TE02 316 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 ZNF700Q9H0M5 742 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 IRF2BPLQ9H1B7 796 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 TCFL5Q9UL49 500 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 PCDHGA6Q9Y5G7 932 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 ORC6Q9Y5N6 252 aa13.27□□□□□ -0.28
COL4A6-206ENST00000477085 WWP2O00308 870 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 FMO6PO60774 539 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 TNFSF15O95150 251 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 CSTAP01040 98 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 TP53P04637 393 aaPredicted RBP13.27□□□□□ -0.29
COL4A6-206ENST00000477085 PTNP21246 168 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 ADH7P40394 386 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 ISL1P61371 349 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 RPP38P78345 283 aaKnown RBP13.27□□□□□ -0.29
COL4A6-206ENST00000477085 PLCXD2Q0VAA5 305 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 CTU2Q2VPK5 515 aaKnown RBP13.27□□□□□ -0.29
COL4A6-206ENST00000477085 CBLN3Q6UW01 205 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 FAM71CQ8NEG0 241 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms