RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 CLDN18P56856 261 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 HBA1P69905 142 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 SORDQ00796 357 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 MPP2Q14168 576 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 NXNQ6DKJ4 435 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 SEM1Q6ZVN7 128 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 C6orf120Q7Z4R8 191 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 TMEM200AQ86VY9 491 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 ZNF614Q8N883 585 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 OR4C3Q8NH37 302 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 OR5AK3PQ8NH89 298 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 PIWIL2Q8TC59 973 aaKnown RBP9.24□□□□□ -0.93
CCM2-208ENST00000476594 PHOSPHO1Q8TCT1 267 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 DYDC1Q8WWB3 177 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 SMPDL3BQ92485 455 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 TLCD1Q96CP7 247 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 C16orf58Q96GQ5 468 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 LURAP1Q96LR2 239 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 OR7D2Q96RA2 312 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 PRRG4Q9BZD6 226 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 C20orf27Q9GZN8 174 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 ZNF395Q9H8N7 513 aaPredicted RBP9.24□□□□□ -0.93
CCM2-208ENST00000476594 NPDC1Q9NQX5 325 aaPredicted RBP9.24□□□□□ -0.93
CCM2-208ENST00000476594 PNPOQ9NVS9 261 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 GPATCH2Q9NW75 528 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 FLRT3Q9NZU0 649 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 CLCF1Q9UBD9 225 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 MCTS1Q9ULC4 181 aaKnown RBP9.24□□□□□ -0.93
CCM2-208ENST00000476594 VDAC3Q9Y277 283 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 ZNF175Q9Y473 711 aa9.24□□□□□ -0.93
CCM2-208ENST00000476594 ANKHD1Q8IWZ3 2542 aaKnown RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 C7orf72A4D263 438 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 EIF4E2O60573 245 aaKnown RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 STX11O75558 287 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 SYNGR4O95473 234 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 CPSF4O95639 269 aaKnown RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 PABPC4LP0CB38 370 aaKnown RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 KITP10721 976 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 ELK4P28324 431 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 ADH6P28332 368 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 P2RX1P51575 399 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 WDR4P57081 412 aaKnown RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 STX1BP61266 288 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 GSTA3Q16772 222 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 FAM174BQ3ZCQ3 159 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 EXOSC6Q5RKV6 272 aaKnown RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 CCNJQ5T5M9 372 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 FBXW10Q5XX13 1052 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 GTF2IRD2BQ6EKJ0 949 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 PPP4R4Q6NUP7 873 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 HDXQ7Z353 690 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 ADGRE4PQ86SQ3 457 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 GALNT10Q86SR1 603 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 GTF2IRD2Q86UP8 949 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 LIX1LQ8IVB5 337 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 GTPBP8Q8N3Z3 284 aaPredicted RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 TMCO5AQ8N6Q1 288 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 METTL25Q8N6Q8 603 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 C9orf106Q8NAJ2 232 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 GATSQ8NAP1 163 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 RELL2Q8NC24 303 aaPredicted RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 NAXEQ8NCW5 288 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 TOR1AIP2Q8NFQ8 470 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 LRRC8CQ8TDW0 803 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 FAM222BQ8WU58 562 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 INTS12Q96CB8 462 aaKnown RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 OTUB1Q96FW1 271 aaPredicted RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 SH3YL1Q96HL8 342 aaPredicted RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 REXO5Q96IC2 774 aaKnown RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 PANX1Q96RD7 426 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 PINK1Q9BXM7 581 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 RMND5AQ9H871 391 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 CACYBPQ9HB71 228 aaKnown RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 TIGARQ9NQ88 270 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 POLE3Q9NRF9 147 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 AIG1Q9NVV5 245 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 MARCOQ9UEW3 520 aaPredicted RBP9.23□□□□□ -0.93
CCM2-208ENST00000476594 BTNL2Q9UIR0 455 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 PACSIN3Q9UKS6 424 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 ZNF337Q9Y3M9 751 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 DTNAQ9Y4J8 743 aa9.23□□□□□ -0.93
CCM2-208ENST00000476594 TUBAL3A6NHL2 446 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 SDHDO14521 159 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 EIF1AYO14602 144 aaKnown RBP9.22□□□□□ -0.93
CCM2-208ENST00000476594 GMFGO60234 142 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 ANP32DO95626 131 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 PLGP00747 810 aaPredicted RBP9.22□□□□□ -0.93
CCM2-208ENST00000476594 IL6P05231 212 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 PGRP06401 933 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 UBL4AP11441 157 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 EPHA3P29320 983 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 MAGEA8P43361 318 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 B3GALT5-AS1P59052 145 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 RAC1P63000 192 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 CBFBQ13951 182 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 GNA13Q14344 377 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 SPANXN4Q5MJ08 99 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 APOOLQ6UXV4 268 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 ESPNLQ6ZVH7 1005 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 CLECL1Q8IZS7 167 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms