RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 MAGEA8P43361 318 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 OMPP47874 163 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 NR0B1P51843 470 aaKnown RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 WNT3P56703 355 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 HNF4GQ14541 408 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 FCN2Q15485 313 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 FAM69AQ5T7M9 428 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 PRAMEF17Q5VTA0 474 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ELP2Q6IA86 826 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 TCTN3Q6NUS6 607 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 LILRA6Q6PI73 481 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 KCTD9Q7L273 389 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ZER1Q7Z7L7 766 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 SERPINA11Q86U17 422 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 TMC8Q8IU68 726 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 JAGN1Q8N5M9 183 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ACOT4Q8N9L9 421 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF511Q8NB15 262 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 OR52E4Q8NGH9 312 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 OR4D11Q8NGI4 311 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 AP3S1Q92572 193 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 UBE2E3Q969T4 207 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 FKBP10Q96AY3 582 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 HRASLS5Q96KN8 279 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 JSRP1Q96MG2 331 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 AKIP1Q9NQ31 210 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 PHPT1Q9NRX4 125 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-204ENST00000476379 FKBP14Q9NWM8 211 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 FBXO34Q9NWN3 711 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 SERGEFQ9UGK8 458 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 ING4Q9UNL4 249 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 HEATR5BQ9P2D3 2071 aa4.67□□□□□ -1.66
CCDC39-204ENST00000476379 C13orf42A0A1B0GVH6 325 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 METTL12A8MUP2 240 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 IMPA2O14732 288 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 AGPAT2O15120 278 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 SCO2O43819 266 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 SOCS5O75159 536 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 APOC3P02656 99 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 HBQ1P09105 142 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF24P17028 368 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 NPR2P20594 1047 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 MAKP20794 623 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 CXCR2P25025 360 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 CD6P30203 668 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 IFNGR2P38484 337 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 SUOXP51687 545 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 PDX1P52945 283 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 PRSS12P56730 875 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 FXYD6P3P58550 94 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 GMFBP60983 142 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 ERVK-25P63136 954 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 PUM1Q14671 1186 aaKnown RBP eCLIP4.66□□□□□ -1.66
CCDC39-204ENST00000476379 AGERQ15109 404 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 PRSS53Q2L4Q9 553 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 USP51Q70EK9 711 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 PRSS41Q7RTY9 318 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 TRIM46Q7Z4K8 759 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF438Q7Z4V0 828 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 TMPRSS12Q86WS5 348 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 PLCZ1Q86YW0 608 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 FTMTQ8N4E7 242 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF676Q8N7Q3 588 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 PROKR2Q8NFJ6 384 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 RPLP0P6Q8NHW5 317 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 TM9SF4Q92544 642 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 RNF170Q96K19 258 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 CACNG6Q9BXT2 260 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 GLIPR2Q9H4G4 154 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 NDRG4Q9ULP0 352 aaKnown RBP4.66□□□□□ -1.66
CCDC39-204ENST00000476379 PLEKHA6Q9Y2H5 1048 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 TMED5Q9Y3A6 229 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 CENPEQ02224 2701 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 PI4KAP42356 2102 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 CCDC163A0A0D9SF12 145 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 DCDC2BA2VCK2 349 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 SLC9B1P1A6NJY1 282 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 FAM47E-STBD1D6RA91 191 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 CHST10O43529 356 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 RDH16O75452 317 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 ALDOBP05062 364 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 PCMT1P22061 227 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 UQCRC2P22695 453 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 CLDN6P56747 220 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 SSX1Q16384 188 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 COQ5Q5HYK3 327 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 ENTPD8Q5MY95 495 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 SYT6Q5T7P8 510 aaPredicted RBP4.66□□□□□ -1.66
CCDC39-204ENST00000476379 GRHL2Q6ISB3 625 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 MZT2AQ6P582 158 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 DCUN1D3Q8IWE4 304 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 TCEAL8Q8IYN2 117 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 MFSD4AQ8N468 514 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 TRMT10AQ8TBZ6 339 aaKnown RBP4.66□□□□□ -1.66
CCDC39-204ENST00000476379 FCGR1BQ92637 280 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 C7orf34Q96L11 122 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 ZNF354BQ96LW1 612 aa4.66□□□□□ -1.66
CCDC39-204ENST00000476379 DCLRE1CQ96SD1 692 aaKnown RBP4.66□□□□□ -1.66
CCDC39-204ENST00000476379 INSM2Q96T92 566 aaPredicted RBP4.66□□□□□ -1.66
CCDC39-204ENST00000476379 CD180Q99467 661 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms