RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 RNF148Q8N7C7 305 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 GALNT11Q8NCW6 608 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 FAM156AQ8NDB6 213 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 ST6GALNAC3Q8NDV1 305 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 ZNF524Q96C55 264 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 TMEM41AQ96HV5 264 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 REXO5Q96IC2 774 aaKnown RBP13.13□□□□□ -0.31
CCNL1-217ENST00000476367 GPR137Q96N19 417 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 CDRT15Q96T59 188 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 G6PC3Q9BUM1 346 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 TBL1XR1Q9BZK7 514 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 BCL2L10Q9HD36 194 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 SPAG4Q9NPE6 437 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 B4GALT7Q9UBV7 327 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 ABCG2Q9UNQ0 655 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 WDR45Q9Y484 360 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 GTF3C1Q12789 2109 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 ALG1L2C9J202 215 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 SNPHO15079 494 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 ZNHIT1O43257 154 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 OIP5O43482 229 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 PDE9AO76083 593 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 EPPINO95925 133 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 NR2F1P10589 423 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 DCTP40126 519 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 SNTA1Q13424 505 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 TOMM20Q15388 145 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 GPR68Q15743 365 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 VMACQ2NL98 169 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 FLYWCH1Q4VC44 716 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 GPAT3Q53EU6 434 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 OR5M10Q6IEU7 315 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 MARCH3Q86UD3 253 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 FAM109AQ8N4B1 249 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 ZNF614Q8N883 585 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 WDSUB1Q8N9V3 476 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 GATSQ8NAP1 163 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 OR1J4Q8NGS1 313 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 GNRHR2Q96P88 292 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 SH3GL1Q99961 368 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 ECSITQ9BQ95 431 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 THUMPD1Q9NXG2 353 aaKnown RBP13.12□□□□□ -0.31
CCNL1-217ENST00000476367 PPP4R1LQ9P1A2 415 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 LIPGQ9Y5X9 500 aa13.12□□□□□ -0.31
CCNL1-217ENST00000476367 C15orf38-AP3S2A0A0A6YYH1 394 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 AGAP5A6NIR3 686 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 FAM220BPB1ANY3 271 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 ADAM11O75078 769 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 HPGDP15428 266 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
CCNL1-217ENST00000476367 PCGF2P35227 344 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 MSX2P35548 267 aaPredicted RBP13.11□□□□□ -0.31
CCNL1-217ENST00000476367 ANXA11P50995 505 aaKnown RBP13.11□□□□□ -0.31
CCNL1-217ENST00000476367 MNAT1P51948 309 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 ATP12AP54707 1039 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 EEFSECP57772 596 aaKnown RBP13.11□□□□□ -0.31
CCNL1-217ENST00000476367 SCARB2Q14108 478 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 CYP51A1Q16850 503 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 PDZK1Q5T2W1 519 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 TIGD3Q6B0B8 471 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 REEP3Q6NUK4 255 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 BNC2Q6ZN30 1099 aaPredicted RBP13.11□□□□□ -0.31
CCNL1-217ENST00000476367 ARPINQ7Z6K5 226 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 IFNEQ86WN2 208 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 LSRQ86X29 649 aaPredicted RBP13.11□□□□□ -0.31
CCNL1-217ENST00000476367 ZNF619Q8N2I2 560 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 C11orf65Q8NCR3 313 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 ARSGQ96EG1 525 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 CLPTM1LQ96KA5 538 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 ALG2Q9H553 416 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 ZDHHC11Q9H8X9 412 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 POLE3Q9NRF9 147 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 UBQLN4Q9NRR5 601 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 C15orf41Q9Y2V0 281 aa13.11□□□□□ -0.31
CCNL1-217ENST00000476367 GPC6Q9Y625 555 aaPredicted RBP13.11□□□□□ -0.31
CCNL1-217ENST00000476367 GMFGO60234 142 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 AQP1P29972 269 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 LCN1P31025 176 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 CLK3P49761 638 aaKnown RBP13.1□□□□□ -0.31
CCNL1-217ENST00000476367 CRISP3P54108 245 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 NCALDP61601 193 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 HPCAP84074 193 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 RBBP4Q09028 425 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 ZNF630Q2M218 657 aaPredicted RBP13.1□□□□□ -0.31
CCNL1-217ENST00000476367 HYAL4Q2M3T9 481 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 PRAMEF8Q5VWM4 474 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 PRAMEF7Q5VXH5 474 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 VRK2Q86Y07 508 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 SPPL2CQ8IUH8 684 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 GHDCQ8N2G8 530 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 OR2T12Q8NG77 320 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 WFDC6Q9BQY6 131 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 SPATA9Q9BWV2 254 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 SLC6A15Q9H2J7 730 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 MTHFD2LQ9H903 347 aaPredicted RBP13.1□□□□□ -0.31
CCNL1-217ENST00000476367 L3MBTL1Q9Y468 752 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 TENM4Q6N022 2769 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 A0A0G2JPF8 293 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 A0A1W2PQD3 144 aa13.1□□□□□ -0.31
CCNL1-217ENST00000476367 HNRNPCL2B2RXH8 293 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms