RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 SAGP10523 405 aaPredicted RBP16.55■□□□□ 0.24
CCM2-207ENST00000475551 PBLDP30039 288 aaPredicted RBP16.55■□□□□ 0.24
CCM2-207ENST00000475551 KHKP50053 298 aa16.55■□□□□ 0.24
CCM2-207ENST00000475551 TMEM115Q12893 351 aaPredicted RBP16.55■□□□□ 0.24
CCM2-207ENST00000475551 ZNF658BQ4V348 819 aaPredicted RBP16.55■□□□□ 0.24
CCM2-207ENST00000475551 C1orf53Q5VUE5 145 aa16.55■□□□□ 0.24
CCM2-207ENST00000475551 KHDRBS2Q5VWX1 349 aaKnown RBP16.55■□□□□ 0.24
CCM2-207ENST00000475551 TMEM220Q6QAJ8 160 aa16.55■□□□□ 0.24
CCM2-207ENST00000475551 ARL9Q6T311 187 aa16.55■□□□□ 0.24
CCM2-207ENST00000475551 CXXC5Q7LFL8 322 aaKnown RBP16.55■□□□□ 0.24
CCM2-207ENST00000475551 HMGN2P46Q86SG4 172 aa16.55■□□□□ 0.24
CCM2-207ENST00000475551 TMEM150AQ86TG1 271 aa16.55■□□□□ 0.24
CCM2-207ENST00000475551 FAM129CQ86XR2 697 aa16.55■□□□□ 0.24
CCM2-207ENST00000475551 ELMOD3Q96FG2 381 aa16.55■□□□□ 0.24
CCM2-207ENST00000475551 TMPRSS13Q9BYE2 586 aa16.55■□□□□ 0.24
CCM2-207ENST00000475551 NANSQ9NR45 359 aa16.55■□□□□ 0.24
CCM2-207ENST00000475551 PIPOXQ9P0Z9 390 aa16.55■□□□□ 0.24
CCM2-207ENST00000475551 MRPS7Q9Y2R9 242 aaKnown RBP16.55■□□□□ 0.24
CCM2-207ENST00000475551 A0A0G2JPF8 293 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 A0A1B0GUH1 482 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 HNRNPCL2B2RXH8 293 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 HNRNPCL3B7ZW38 293 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 SYT5O00445 386 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 GALTP07902 379 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 FGF2P09038 288 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 HNRNPCL4P0DMR1 293 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 RAB3BP20337 219 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 TBXA2RP21731 343 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 CALCRP30988 508 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 GATMP50440 423 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 GDPD4Q6W3E5 623 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 ZNF620Q6ZNG0 422 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 SZRD1Q7Z422 152 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 ARL14EPQ8N8R7 260 aaPredicted RBP16.54■□□□□ 0.24
CCM2-207ENST00000475551 OR2T33Q8NG76 320 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 OR11G2Q8NGC1 345 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 SMIM4Q8WVI0 70 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 SORCS1Q8WY21 1168 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 THAP4Q8WY91 577 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 GLYATL1Q969I3 302 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 MS4A7Q9GZW8 240 aaPredicted RBP16.54■□□□□ 0.24
CCM2-207ENST00000475551 PLXNA2O75051 1894 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 KLF4O43474 513 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 RGS11O94810 467 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 FGBP02675 491 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 GIPP09681 153 aaPredicted RBP16.54■□□□□ 0.24
CCM2-207ENST00000475551 ALPPL2P10696 532 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 FUT5Q11128 374 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 ZNF697Q5TEC3 545 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 SHEQ5VZ18 495 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 UBE2Q1Q7Z7E8 422 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 BCL7CQ8WUZ0 217 aaPredicted RBP16.54■□□□□ 0.24
CCM2-207ENST00000475551 TOX2Q96NM4 488 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 ARHGDIGQ99819 225 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 GSDMCQ9BYG8 508 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 SLC6A15Q9H2J7 730 aa16.54■□□□□ 0.24
CCM2-207ENST00000475551 PLXND1Q9Y4D7 1925 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 PI15O43692 258 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 XPAP23025 273 aaPredicted RBP16.53■□□□□ 0.24
CCM2-207ENST00000475551 NFYAP23511 347 aaPredicted RBP16.53■□□□□ 0.24
CCM2-207ENST00000475551 GDNFP39905 211 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 CCR8P51685 355 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 DECR1Q16698 335 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 PIP5KL1Q5T9C9 394 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 B3GNTL1Q67FW5 361 aaPredicted RBP16.53■□□□□ 0.24
CCM2-207ENST00000475551 ADCK2Q7Z695 626 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 TMEM99Q8N816 258 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 CHST14Q8NCH0 376 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 SCARB1Q8WTV0 552 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 ACOT11Q8WXI4 607 aaPredicted RBP16.53■□□□□ 0.24
CCM2-207ENST00000475551 RGMAQ96B86 450 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 ZNF689Q96CS4 500 aaPredicted RBP16.53■□□□□ 0.24
CCM2-207ENST00000475551 SLC7A5P2Q9GIP4 190 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 RHBGQ9H310 441 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 KLHL1Q9NR64 748 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 INPP5EQ9NRR6 644 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 ZCCHC3Q9NUD5 404 aaKnown RBP16.53■□□□□ 0.24
CCM2-207ENST00000475551 NKIRAS2Q9NYR9 191 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 YIPF1Q9Y548 306 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 NUP210Q8TEM1 1887 aaPredicted RBP16.53■□□□□ 0.24
CCM2-207ENST00000475551 DAPL1A0PJW8 107 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 CPSF4LA6NMK7 179 aaKnown RBP16.53■□□□□ 0.24
CCM2-207ENST00000475551 MCRIP1C9JLW8 97 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 NTN1O95631 604 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 MT-ND5P03915 603 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 LPLP06858 475 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 CPN1P15169 458 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 PSMB1P20618 241 aaKnown RBP16.53■□□□□ 0.24
CCM2-207ENST00000475551 SDHBP21912 280 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 TAS2R43P59537 309 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 CAMK1Q14012 370 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 MEPCEQ7L2J0 689 aaKnown RBP16.53■□□□□ 0.24
CCM2-207ENST00000475551 HSD17B13Q7Z5P4 300 aaPredicted RBP16.53■□□□□ 0.24
CCM2-207ENST00000475551 BVESQ8NE79 360 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 LMLNQ96KR4 655 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 F2RL3Q96RI0 385 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 IFT27Q9BW83 186 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 MS4A8Q9BY19 250 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 CHIAQ9BZP6 476 aa16.53■□□□□ 0.24
CCM2-207ENST00000475551 ZCCHC4Q9H5U6 513 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms