RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 GNAO1P09471 354 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 GKN3PP0CG01 181 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 HPGDP15428 266 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 CSRP1P21291 193 aaKnown RBP12.65□□□□□ -0.38
TRAF4-210ENST00000475329 FUT4P22083 530 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 CBLP22681 906 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 UGT2B15P54855 530 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 NRG3P56975 720 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 HOXC5Q00444 222 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 PCOLCEQ15113 449 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 SEC23BQ15437 767 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 USP51Q70EK9 711 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF550Q7Z398 422 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 PRR22Q8IZ63 422 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 ESX1Q8N693 406 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 AQP11Q8NBQ7 271 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 ADAMTS16Q8TE57 1224 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 SLC38A4Q969I6 547 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 OMA1Q96E52 524 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 SLC41A3Q96GZ6 507 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 PRR14Q9BWN1 585 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 GABARAPL3Q9BY60 117 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 SPRY4Q9C004 299 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF700Q9H0M5 742 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 PNPLA3Q9NST1 481 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 FOXJ2Q9P0K8 574 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 ENOPH1Q9UHY7 261 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 MGAT4BQ9UQ53 548 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 NTNG1Q9Y2I2 539 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 WDR87Q6ZQQ6 2873 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 HEATR5AQ86XA9 2040 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 IGHV1-45A0A0A0MS14 117 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 TRAPPC13A5PLN9 417 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 BCKDKO14874 412 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 SLC16A6O15403 523 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 OR10H3O60404 316 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 ABCB7O75027 752 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 BCAS1O75363 584 aaPredicted RBP12.64□□□□□ -0.39
TRAF4-210ENST00000475329 CSTAP01040 98 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 LYNP07948 512 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 CYP4B1P13584 511 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 PRG2P13727 222 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 TBXA2RP21731 343 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 ABCD3P28288 659 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 PNLIPRP2P54317 469 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 TPD52P55327 224 aaPredicted RBP12.64□□□□□ -0.39
TRAF4-210ENST00000475329 PLAURQ03405 335 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 IL18R1Q13478 541 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 KLHL26Q53HC5 615 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 SWT1Q5T5J6 900 aaKnown RBP12.64□□□□□ -0.39
TRAF4-210ENST00000475329 FAM69BQ5VUD6 431 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 ZNF770Q6IQ21 691 aaPredicted RBP12.64□□□□□ -0.39
TRAF4-210ENST00000475329 PODNL1Q6PEZ8 512 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 TIPARPQ7Z3E1 657 aaKnown RBP12.64□□□□□ -0.39
TRAF4-210ENST00000475329 GDF7Q7Z4P5 450 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 ZNF440Q8IYI8 595 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 C8orf59Q8N0T1 100 aaPredicted RBP12.64□□□□□ -0.39
TRAF4-210ENST00000475329 CACTIN-AS1Q8N1I8 211 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 TOR1AIP2Q8NFQ8 470 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 OR5L2Q8NGL0 311 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 OR4C3Q8NH37 302 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 SLC7A13Q8TCU3 470 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 GATA6Q92908 595 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 ADOQ96SZ5 270 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 B3GNT4Q9C0J1 378 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 FLRT3Q9NZU0 649 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 HS3ST3B1Q9Y662 390 aa12.64□□□□□ -0.39
TRAF4-210ENST00000475329 LOC100130705A0A1B0GUX0 176 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 H3BNH8 94 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 ICOSLGO75144 302 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 ZFAND5O76080 213 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 TNFSF15O95150 251 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 TNFAIP8O95379 198 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 CLIC3O95833 236 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 NGFRP08138 427 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 COX6A1P12074 109 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 TCN2P20062 427 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 MMP11P24347 488 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 HTR2AP28223 471 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 IFNGR2P38484 337 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 ADH7P40394 386 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 RPS6KA3P51812 740 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 KEAP1Q14145 624 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 OR1Q1Q15612 314 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 EXT1Q16394 746 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 BTBD16Q32M84 506 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 FNDC7Q5VTL7 733 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 ZNF613Q6PF04 617 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 PARP8Q8N3A8 854 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 FAM71CQ8NEG0 241 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 OR4K5Q8NGD3 323 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 GTPBP3Q969Y2 492 aaKnown RBP12.63□□□□□ -0.39
TRAF4-210ENST00000475329 PHOX2BQ99453 314 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 NIPSNAP1Q9BPW8 284 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 DGCR6LQ9BY27 220 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 TRIM2Q9C040 744 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 TMEM27Q9HBJ8 222 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 TCFL5Q9UL49 500 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 SLC7A7Q9UM01 511 aa12.63□□□□□ -0.39
TRAF4-210ENST00000475329 A0A1W2PQ72 361 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms