RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 OR4K17Q8NGC6 315 aa13.16□□□□□ -0.3
PCCB-212ENST00000474833 CDC26Q8NHZ8 85 aa13.16□□□□□ -0.3
PCCB-212ENST00000474833 SMAP2Q8WU79 429 aaPredicted RBP13.16□□□□□ -0.3
PCCB-212ENST00000474833 FCRL1Q96LA6 429 aa13.16□□□□□ -0.3
PCCB-212ENST00000474833 CCT7Q99832 543 aa13.16□□□□□ -0.3
PCCB-212ENST00000474833 OR10A4Q9H209 315 aa13.16□□□□□ -0.3
PCCB-212ENST00000474833 DSN1Q9H410 356 aa13.16□□□□□ -0.3
PCCB-212ENST00000474833 FOLH1BQ9HBA9 442 aa13.16□□□□□ -0.3
PCCB-212ENST00000474833 C1orf109Q9NX04 203 aa13.16□□□□□ -0.3
PCCB-212ENST00000474833 TAS2R9Q9NYW1 312 aa13.16□□□□□ -0.3
PCCB-212ENST00000474833 PCNX3Q9H6A9 2034 aa13.16□□□□□ -0.3
PCCB-212ENST00000474833 YLPM1P49750 1951 aaKnown RBP13.16□□□□□ -0.3
PCCB-212ENST00000474833 H3BML4 177 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 PSMG1O95456 288 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 FCGR2AP12318 317 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 HK1P19367 917 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 ALDH3A1P30838 453 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 THBS2P35442 1172 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 SERPINB5P36952 375 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 NCBP2P52298 156 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCCB-212ENST00000474833 EFR3AQ14156 821 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 CTU2Q2VPK5 515 aaKnown RBP13.15□□□□□ -0.3
PCCB-212ENST00000474833 NCMAPQ5T1S8 102 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 DNAJC14Q6Y2X3 702 aaPredicted RBP13.15□□□□□ -0.3
PCCB-212ENST00000474833 LARP4Q71RC2 724 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCCB-212ENST00000474833 OR2L13Q8N349 312 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 MREGQ8N565 214 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 OR4N2Q8NGD1 307 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 GTPBP3Q969Y2 492 aaKnown RBP13.15□□□□□ -0.3
PCCB-212ENST00000474833 S100PBPQ96BU1 408 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 EFHD2Q96C19 240 aaPredicted RBP13.15□□□□□ -0.3
PCCB-212ENST00000474833 DTNBP1Q96EV8 351 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 GMPPAQ96IJ6 420 aaPredicted RBP13.15□□□□□ -0.3
PCCB-212ENST00000474833 TRAF4Q9BUZ4 470 aaPredicted RBP13.15□□□□□ -0.3
PCCB-212ENST00000474833 TMEM109Q9BVC6 243 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 LRTM1Q9HBL6 345 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 EML4Q9HC35 981 aaKnown RBP13.15□□□□□ -0.3
PCCB-212ENST00000474833 TMEM160Q9NX00 188 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 FLRT3Q9NZU0 649 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 SLC17A7Q9P2U7 560 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 C19orf53Q9UNZ5 99 aaPredicted RBP13.15□□□□□ -0.3
PCCB-212ENST00000474833 TMED5Q9Y3A6 229 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 PTGDR2Q9Y5Y4 395 aa13.15□□□□□ -0.3
PCCB-212ENST00000474833 DYNC1I1O14576 645 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 CLOCKO15516 846 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 SCO2O43819 266 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 FADS1O60427 444 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 SEC22BO75396 215 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 JUNP05412 331 aaKnown RBP13.14□□□□□ -0.31
PCCB-212ENST00000474833 FGF4P08620 206 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 IL12BP29460 328 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 EVI2BP34910 448 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 KRT20P35900 424 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 PNLIPRP2P54317 469 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 MRPS22P82650 360 aaKnown RBP13.14□□□□□ -0.31
PCCB-212ENST00000474833 VLDLRP98155 873 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 FAPQ12884 760 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 ZNF155Q12901 538 aaPredicted RBP13.14□□□□□ -0.31
PCCB-212ENST00000474833 GANABQ14697 944 aaKnown RBP13.14□□□□□ -0.31
PCCB-212ENST00000474833 PRSS53Q2L4Q9 553 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 ZNF672Q499Z4 452 aaPredicted RBP13.14□□□□□ -0.31
PCCB-212ENST00000474833 Q6ZSR9 355 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 KBTBD8Q8NFY9 601 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 OR2T11Q8NH01 316 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 TCP10LQ8TDR4 215 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 AMDHD1Q96NU7 426 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 MECRQ9BV79 373 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 TUBB1Q9H4B7 451 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 MED11Q9P086 117 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 PPP4R1LQ9P1A2 415 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 GPR52Q9Y2T5 361 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 EMC9Q9Y3B6 208 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 DNAJC15Q9Y5T4 150 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 PLCE1Q9P212 2302 aa13.14□□□□□ -0.31
PCCB-212ENST00000474833 PKD1L1Q8TDX9 2849 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 ALPK2Q86TB3 2170 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 SHISA8B8ZZ34 492 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 LINC01387J3KSC0 135 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 UPK1AO00322 258 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 LSM1O15116 133 aaKnown RBP13.13□□□□□ -0.31
PCCB-212ENST00000474833 TBX19O60806 448 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 GCM2O75603 506 aaPredicted RBP13.13□□□□□ -0.31
PCCB-212ENST00000474833 CHRNGP07510 517 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 SDC1P18827 310 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 PSG6Q00889 435 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 PDE7AQ13946 482 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 ARL13AQ5H913 290 aaPredicted RBP13.13□□□□□ -0.31
PCCB-212ENST00000474833 TMEM107Q6UX40 140 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 DTX2Q86UW9 622 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 SLC44A2Q8IWA5 706 aaPredicted RBP13.13□□□□□ -0.31
PCCB-212ENST00000474833 OR10H5Q8NGA6 315 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 TWIST2Q8WVJ9 160 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 ROBO4Q8WZ75 1007 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 C1GALT1C1Q96EU7 318 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 ADGRG7Q96K78 797 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 TRIM2Q9C040 744 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 AMBRA1Q9C0C7 1298 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 GLIPR2Q9H4G4 154 aa13.13□□□□□ -0.31
PCCB-212ENST00000474833 DDX18Q9NVP1 670 aaKnown RBP13.13□□□□□ -0.31
PCCB-212ENST00000474833 TTC36A6NLP5 189 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms