RNA–Protein interactions for RNA: ENST00000474481.1

ATAD3B-204, Transcript of ATPase family, AAA domain containing 3B, human

TSL 2

Gene ATAD3B, Length 3,367 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATAD3B-204	ENST00000474481	CNIH4	Q9P003	139 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SPACA6	W5XKT8	324 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	NUP210L	Q5VU65	1888 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481		A0A1W2PR77	199 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	TMEM129	A0AVI4	362 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481		A8MUA0	341 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481		H3BQ06	376 aa	Predicted RBP	13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	MED26	O95402	600 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CPE	P16870	476 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SMAD4	Q13485	552 aa	Known RBP	13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	ZNF542P	Q5EBM4	170 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	DGAT2L6	Q6ZPD8	337 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	PLEKHM3	Q6ZWE6	761 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CYP4Z2P	Q8N1L4	340 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	AMER2	Q8N7J2	671 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	C19orf47	Q8N9M1	422 aa	Known RBP	13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	TEX47	Q8TBZ9	253 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	OSTF1	Q92882	214 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CCDC120	Q96HB5	630 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	GPR174	Q9BXC1	333 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SLC13A4	Q9UKG4	626 aa		13.56	□□□□□ -0.24
ATAD3B-204	ENST00000474481	IRGM	A1A4Y4	181 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SPN	P16150	400 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	ETV5	P41161	510 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	ETV1	P50549	477 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	BLK	P51451	505 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	VSX2	P58304	361 aa	Predicted RBP	13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	HOXC5	Q00444	222 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	GAS6	Q14393	721 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	WDR88	Q6ZMY6	472 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	BRIX1	Q8TDN6	353 aa	Known RBP	13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	TMEM246	Q9BRR3	403 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	FBXO34	Q9NWN3	711 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	TGFBR3L	H3BV60	316 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	FOXS1	O43638	330 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SOX30	O94993	753 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	WNT1	P04628	370 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	DRD5	P21918	477 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	FXYD6P3	P58550	94 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	KLHL22	Q53GT1	634 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CCNJ	Q5T5M9	372 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	RNF113B	Q8IZP6	322 aa	Known RBP	13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	PCNP	Q8WW12	178 aa	Known RBP	13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CHCHD6	Q9BRQ6	235 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	TTYH1	Q9H313	450 aa	Predicted RBP	13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	EXOG	Q9Y2C4	368 aa	Known RBP	13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481		A0A075B6Q4	140 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481		J3QRE1	110 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	STK25	O00506	426 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CDC42EP2	O14613	210 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	PIP5K1C	O60331	668 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CSF2	P04141	144 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	ID2	Q02363	134 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	MLLT1	Q03111	559 aa	Predicted RBP	13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	PAQR6	Q6TCH4	344 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	MEX3D	Q86XN8	651 aa	Known RBP	13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	GRAMD2A	Q8IUY3	354 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CACTIN-AS1	Q8N1I8	211 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	DACT3	Q96B18	629 aa	Predicted RBP	13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	TRMT61A	Q96FX7	289 aa	Known RBP	13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CHRNA10	Q9GZZ6	450 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	NLGN3	Q9NZ94	848 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SEC14L4	Q9UDX3	406 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SLC7A7	Q9UM01	511 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	ADAMTS20	P59510	1910 aa		13.55	□□□□□ -0.24
ATAD3B-204	ENST00000474481	HYKK	A2RU49	373 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	BLACE	A4D250	179 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SGK494	L7N484	410 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SSX4	O60224	188 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	HSMCR30	P0CW71	290 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CKMT1A	P12532	417 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	PHC2	Q8IXK0	858 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CELF2-AS1	Q8N7Q2	184 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	PIK3R3	Q92569	461 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	KLHDC7B	Q96G42	594 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SF3B6	Q9Y3B4	125 aa	Known RBP	13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CDH10	Q9Y6N8	788 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	EML5	Q05BV3	1969 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	TRAPPC13	A5PLN9	417 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	HR	O43593	1189 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	EIF2S1	P05198	315 aa	Known RBP	13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	ZGLP1	P0C6A0	271 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SOX3	P41225	446 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SNAPC1	Q16533	368 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	MRPL2	Q5T653	305 aa	Known RBP	13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	NRM	Q8IXM6	262 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	SLC34A3	Q8N130	599 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	ANKK1	Q8NFD2	765 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	PRO3102	Q9H379	93 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	QPCTL	Q9NXS2	382 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	STUB1	Q9UNE7	303 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	CFL2	Q9Y281	166 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	LILRA5	A6NI73	299 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	PRG2	P13727	222 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	NME1	P15531	152 aa	Known RBP	13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	GNS	P15586	552 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	TBXA2R	P21731	343 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	PGGHG	Q32M88	737 aa		13.54	□□□□□ -0.24
ATAD3B-204	ENST00000474481	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms