RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SLC24A5Q71RS6 500 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 OTOAQ7RTW8 1153 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PIGWQ7Z7B1 504 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 DEFB128Q7Z7B8 93 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PCGF5Q86SE9 256 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM150AQ86TG1 271 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 KBTBD6Q86V97 674 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 IQCHQ86VS3 1027 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CEP57Q86XR8 500 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PSTKQ8IV42 348 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 LINC00346Q8IVM7 164 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ARID3BQ8IVW6 561 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 MFSD6LQ8IWD5 586 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CFAP206Q8IYR0 622 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CDK20Q8IZL9 346 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CENPLQ8N0S6 344 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 NUP93Q8N1F7 819 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC43Q8N309 656 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ATPAF2Q8N5M1 289 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 BANPQ8N9N5 519 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 COLGALT1Q8NBJ5 622 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 BBOF1Q8ND07 529 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 MCUQ8NE86 351 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 NFAM1Q8NET5 270 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 OR5M8Q8NGP6 311 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 WFDC5Q8TCV5 224 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 URGCPQ8TCY9 931 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TCP10LQ8TDR4 215 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 AGAP11Q8TF27 550 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SSC4DQ8WTU2 575 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PYROXD1Q8WU10 500 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TFB1MQ8WVM0 346 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SEPT8Q92599 483 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 P3H4Q92791 437 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FBXO32Q969P5 355 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TBC1D31Q96DN5 1066 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ERLEC1Q96DZ1 483 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SAT2Q96F10 170 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 THOC1Q96FV9 657 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CHMP6Q96FZ7 201 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CERS2Q96G23 380 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ATXN7L3BQ96GX2 97 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SPATA17Q96L03 361 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF597Q96LX8 424 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 MAGEB18Q96M61 343 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CEP295NLQ96MC4 621 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 GLT1D1Q96MS3 346 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SERPINB11Q96P15 392 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 KLHL5Q96PQ7 755 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FAM111AQ96PZ2 611 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TGS1Q96RS0 853 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TRIB3Q96RU7 358 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TSPAN18Q96SJ8 248 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SORT1Q99523 831 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 IL12RB2Q99665 862 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 RBBP8Q99708 897 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 NKX3-1Q99801 234 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 EBNA1BP2Q99848 306 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 EBF4Q9BQW3 602 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ACBD6Q9BR61 282 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM175Q9BSA9 504 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FICDQ9BVA6 458 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TDRD1Q9BXT4 1180 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FTHL17Q9BXU8 183 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 KRTAP4-1Q9BYQ7 146 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ROPN1BQ9BZX4 212 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 OR2B2Q9GZK3 357 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 C20orf27Q9GZN8 174 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SHARPINQ9H0F6 387 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 HRH4Q9H3N8 390 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TRABDQ9H4I3 376 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CNOT10Q9H9A5 744 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 VPS37BQ9H9H4 285 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CAB39LQ9H9S4 337 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ROPN1Q9HAT0 212 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 XAB2Q9HCS7 855 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FBXO6Q9NRD1 293 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FGF21Q9NSA1 209 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 HOMER3Q9NSC5 361 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF701Q9NV72 531 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FGFR1OP2Q9NVK5 253 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM161AQ9NX61 479 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 P4HTMQ9NXG6 502 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 RHCGQ9UBD6 479 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 MTRRQ9UBK8 725 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FETUBQ9UGM5 382 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SLC2A6Q9UGQ3 507 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 RSPH14Q9UHP6 348 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SLC24A2Q9UI40 661 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 VPS28Q9UK41 221 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ADAM28Q9UKQ2 775 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 VANGL2Q9ULK5 521 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 STAP1Q9ULZ2 295 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SCML2Q9UQR0 700 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CHKBQ9Y259 395 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PTRH2Q9Y3E5 179 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 HBS1LQ9Y450 684 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FAM169AQ9Y6X4 670 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 DCHS2Q6V1P9 2916 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ITPR1Q14643 2758 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms