RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ATP6AP1LQ52LC2 224 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 FAM214BQ7L5A3 538 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 WDR75Q8IWA0 830 aaKnown RBP13.73□□□□□ -0.21
VTI1A-203ENST00000472892 NATD1Q8N6N6 113 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 COX18Q8N8Q8 333 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 ZNF610Q8N9Z0 462 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 GATSQ8NAP1 163 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 AGR3Q8TD06 166 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 AENQ8WTP8 325 aaKnown RBP13.73□□□□□ -0.21
VTI1A-203ENST00000472892 OR5P2Q8WZ92 322 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 ZBTB8AQ96BR9 441 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 COQ8BQ96D53 544 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 ADGRG7Q96K78 797 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 NPAS1Q99742 590 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 PIGUQ9H490 435 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 DLL4Q9NR61 685 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 PLSCR4Q9NRQ2 329 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 ZCCHC3Q9NUD5 404 aaKnown RBP13.73□□□□□ -0.21
VTI1A-203ENST00000472892 MED17Q9NVC6 651 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 EIF3LQ9Y262 564 aaKnown RBP13.73□□□□□ -0.21
VTI1A-203ENST00000472892 VPS13CQ709C8 3753 aa13.73□□□□□ -0.21
VTI1A-203ENST00000472892 DEFB108AA8MXU0 73 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 C16orf97H3BN30 126 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 SCDO00767 359 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 EIF1AYO14602 144 aaKnown RBP13.72□□□□□ -0.21
VTI1A-203ENST00000472892 TYROBPO43914 113 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 SOX30O94993 753 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 BPGMP07738 259 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 POU2F1P14859 743 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 FOSL1P15407 271 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 HPGDP15428 266 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 CREB1P16220 341 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 CD53P19397 219 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 IL11P20809 199 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 ETV4P43268 484 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 EIF1AXP47813 144 aaKnown RBP13.72□□□□□ -0.21
VTI1A-203ENST00000472892 SLC6A8P48029 635 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 POU6F2P78424 691 aaPredicted RBP13.72□□□□□ -0.21
VTI1A-203ENST00000472892 PTGR1Q14914 329 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 CTU2Q2VPK5 515 aaKnown RBP13.72□□□□□ -0.21
VTI1A-203ENST00000472892 PLPPR5Q32ZL2 321 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 CCNJQ5T5M9 372 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 IL23RQ5VWK5 629 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 RIMKLAQ8IXN7 391 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 OR10D3Q8NH80 312 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 OTUB1Q96FW1 271 aaPredicted RBP13.72□□□□□ -0.21
VTI1A-203ENST00000472892 TMEM109Q9BVC6 243 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 PAQR5Q9NXK6 330 aaPredicted RBP13.72□□□□□ -0.21
VTI1A-203ENST00000472892 KLHL28Q9NXS3 571 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 ZNF226Q9NYT6 803 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 C6orf203Q9P0P8 240 aaPredicted RBP13.72□□□□□ -0.21
VTI1A-203ENST00000472892 PROCRQ9UNN8 238 aa13.72□□□□□ -0.21
VTI1A-203ENST00000472892 SIAH2O43255 324 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 LINGO3P0C6S8 592 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 CRYGSP22914 178 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 HOXC12P31275 282 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 CCKARP32238 428 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 CCT3P49368 545 aaKnown RBP13.71□□□□□ -0.21
VTI1A-203ENST00000472892 ZNF41P51814 821 aaPredicted RBP13.71□□□□□ -0.21
VTI1A-203ENST00000472892 LASP1Q14847 261 aaKnown RBP13.71□□□□□ -0.21
VTI1A-203ENST00000472892 CD226Q15762 336 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 LSM12Q3MHD2 195 aaKnown RBP13.71□□□□□ -0.21
VTI1A-203ENST00000472892 CDC73Q6P1J9 531 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 EMBQ6PCB8 327 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 ESPNLQ6ZVH7 1005 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 KRTCAP2Q8N6L1 136 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 FNDC5Q8NAU1 212 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 OR56A1Q8NGH5 318 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 B4GALNT2Q8NHY0 566 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 POC1BQ8TC44 478 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 NUDT8Q8WV74 236 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 JADE3Q92613 823 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 CDS1Q92903 461 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 GMPPAQ96IJ6 420 aaPredicted RBP13.71□□□□□ -0.21
VTI1A-203ENST00000472892 RNF145Q96MT1 663 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 PRPF18Q99633 342 aaKnown RBP13.71□□□□□ -0.21
VTI1A-203ENST00000472892 KLHDC3Q9BQ90 382 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 MED18Q9BUE0 208 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 C1orf50Q9BV19 199 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 ACTRT3Q9BYD9 372 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 PRRG4Q9BZD6 226 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 HOXD1Q9GZZ0 328 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 CXorf36Q9H7Y0 433 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 NEUROD4Q9HD90 331 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 ATAD3AQ9NVI7 634 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 GPATCH2Q9NW75 528 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 BEX4Q9NWD9 120 aaPredicted RBP13.71□□□□□ -0.21
VTI1A-203ENST00000472892 SNX8Q9Y5X2 465 aa13.71□□□□□ -0.21
VTI1A-203ENST00000472892 A0A0J9YW62 118 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 C6orf47O95873 294 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 OPN1LWP04000 364 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 PRPS1L1P21108 318 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 EIF1P41567 113 aaKnown RBP13.7□□□□□ -0.22
VTI1A-203ENST00000472892 KCNJ5P48544 419 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 C21orf58P58505 322 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 KLHL26Q53HC5 615 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 WDR93Q6P2C0 686 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 C22orf34Q6ZV56 151 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 MTERF4Q7Z6M4 381 aaKnown RBP13.7□□□□□ -0.22
VTI1A-203ENST00000472892 CXorf67Q86X51 503 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms