RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 H3BML4 177 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 H3BNH8 94 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 GTPBP1O00178 669 aaKnown RBP8.27□□□□□ -1.09
SYN3-211ENST00000472027 RFXANKO14593 260 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 POLR3GO15318 223 aaPredicted RBP8.27□□□□□ -1.09
SYN3-211ENST00000472027 AGR2O95994 175 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 COX6B1P14854 86 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 POU3F2P20265 443 aaPredicted RBP8.27□□□□□ -1.09
SYN3-211ENST00000472027 RNF144AP50876 292 aaPredicted RBP8.27□□□□□ -1.09
SYN3-211ENST00000472027 POLR2JP52435 117 aaKnown RBP8.27□□□□□ -1.09
SYN3-211ENST00000472027 SUCLG1P53597 346 aaKnown RBP8.27□□□□□ -1.09
SYN3-211ENST00000472027 CLDN15P56746 228 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 TFF3Q07654 80 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 TMEM44Q2T9K0 475 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 ATAD3BQ5T9A4 648 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 CBLN3Q6UW01 205 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 PLXDC2Q6UX71 529 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 OLIG3Q7RTU3 272 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 C16orf62Q7Z3J2 963 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 RNF130Q86XS8 419 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 UBQLNLQ8IYU4 475 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 C9orf106Q8NAJ2 232 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 OR9I1Q8NGQ6 314 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 B4GALNT2Q8NHY0 566 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 MBD3L2Q8NHZ7 208 aaPredicted RBP8.27□□□□□ -1.09
SYN3-211ENST00000472027 UCN2Q96RP3 112 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 NPAS1Q99742 590 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 SPOCK3Q9BQ16 436 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 KLHDC3Q9BQ90 382 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 ZNF350Q9GZX5 532 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 ENKD1Q9H0I2 346 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 RUBCNLQ9H714 662 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 MED17Q9NVC6 651 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 ZNF629Q9UEG4 869 aaPredicted RBP8.27□□□□□ -1.09
SYN3-211ENST00000472027 KCNE5Q9UJ90 142 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 MKLN1Q9UL63 735 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 CARD8Q9Y2G2 431 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 DTNAQ9Y4J8 743 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 AP4B1Q9Y6B7 739 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 ZNF407Q9C0G0 2248 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 ICE1Q9Y2F5 2266 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 PRRC2CQ9Y520 2896 aaKnown RBP8.26□□□□□ -1.09
SYN3-211ENST00000472027 FAM234BA2RU67 622 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 PRAMEF27A3QJZ7 478 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 SERINC4A6NH21 518 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 H0YC42 278 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 HMGN4O00479 90 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 OIP5O43482 229 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 HCRTR2O43614 444 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 UGT2B17O75795 530 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 RCBTB2O95199 551 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 ANP32DO95626 131 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 GUSBP08236 651 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 ZCCHC18P0CG32 403 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 PRF1P14222 555 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 BMP5P22003 454 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 CTSSP25774 331 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 MRPL19P49406 292 aaKnown RBP8.26□□□□□ -1.09
SYN3-211ENST00000472027 KHKP50053 298 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 P2RX1P51575 399 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 ZNF41P51814 821 aaPredicted RBP8.26□□□□□ -1.09
SYN3-211ENST00000472027 AGFG1P52594 562 aaKnown RBP8.26□□□□□ -1.09
SYN3-211ENST00000472027 ZNF136P52737 540 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 TPD52P55327 224 aaPredicted RBP8.26□□□□□ -1.09
SYN3-211ENST00000472027 CLDN20P56880 219 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 EEFSECP57772 596 aaKnown RBP8.26□□□□□ -1.09
SYN3-211ENST00000472027 STX1BP61266 288 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 ZNF117Q03924 483 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 ZNF141Q15928 474 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 PLPPR5Q32ZL2 321 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 SLC25A35Q3KQZ1 300 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 GPAT3Q53EU6 434 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 COX20Q5RI15 118 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 PDZK1Q5T2W1 519 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 AP1ARQ63HQ0 302 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 TYW3Q6IPR3 259 aaKnown RBP8.26□□□□□ -1.09
SYN3-211ENST00000472027 POMZP3Q6PJE2 187 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 CHMP1BQ7LBR1 199 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 MEIOBQ8N635 442 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 ZNF614Q8N883 585 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 ACBD4Q8NC06 268 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 POC1BQ8TC44 478 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 PNPT1Q8TCS8 783 aaKnown RBP8.26□□□□□ -1.09
SYN3-211ENST00000472027 ZFP90Q8TF47 636 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 WNT2BQ93097 391 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 VPS33AQ96AX1 596 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 ZBTB8AQ96BR9 441 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 ROPN1LQ96C74 230 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 ZG16BQ96DA0 208 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 THOC1Q96FV9 657 aaKnown RBP8.26□□□□□ -1.09
SYN3-211ENST00000472027 ITCHQ96J02 903 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 NMUR2Q9GZQ4 415 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 SAP130Q9H0E3 1048 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 RMND5AQ9H871 391 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 NPDC1Q9NQX5 325 aaPredicted RBP8.26□□□□□ -1.09
SYN3-211ENST00000472027 SLC6A13Q9NSD5 602 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 CCDC167Q9P0B6 97 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 CLCF1Q9UBD9 225 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 ICAM5Q9UMF0 924 aa8.26□□□□□ -1.09
SYN3-211ENST00000472027 WDR45Q9Y484 360 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms