RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 RFPL3SP0C7P2 107 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 PSMA4P25789 261 aaKnown RBP9.02□□□□□ -0.97
SF3A1-207ENST00000471342 EVI2BP34910 448 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 OR1E2P47887 323 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 TNFSF10P50591 281 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 SSR4P51571 173 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 PSPHP78330 225 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 HOXC5Q00444 222 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 ZNF117Q03924 483 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 DECR1Q16698 335 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 FLYWCH1Q4VC44 716 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 IRAK1BP1Q5VVH5 260 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 ISLR2Q6UXK2 745 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 LINC00114Q6XXX2 140 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 WDR88Q6ZMY6 472 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 LINC00696Q6ZRV3 163 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 C16orf62Q7Z3J2 963 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 PIWIL3Q7Z3Z3 882 aaKnown RBP9.02□□□□□ -0.97
SF3A1-207ENST00000471342 PATL1Q86TB9 770 aaKnown RBP9.02□□□□□ -0.97
SF3A1-207ENST00000471342 DHFR2Q86XF0 187 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 SLC30A8Q8IWU4 369 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 Q8NA96 180 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 GOLM1Q8NBJ4 401 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 BHLHE22Q8NFJ8 381 aaPredicted RBP9.02□□□□□ -0.97
SF3A1-207ENST00000471342 OR2M3Q8NG83 312 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 EXTL1Q92935 676 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 PYURFQ96I23 114 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 HSH2DQ96JZ2 352 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 BARD1Q99728 777 aaKnown RBP9.02□□□□□ -0.97
SF3A1-207ENST00000471342 PRSS27Q9BQR3 290 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 G6PC3Q9BUM1 346 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 PINK1Q9BXM7 581 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 MUC13Q9H3R2 512 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 RYDENQ9NUL5 291 aaKnown RBP9.02□□□□□ -0.97
SF3A1-207ENST00000471342 FBXL2Q9UKC9 423 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 A4GNTQ9UNA3 340 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 ABCG2Q9UNQ0 655 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 PCDHGB3Q9Y5G1 929 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 TPRP12270 2363 aaKnown RBP9.02□□□□□ -0.97
SF3A1-207ENST00000471342 TNRC6AQ8NDV7 1962 aaKnown RBP9.01□□□□□ -0.97
SF3A1-207ENST00000471342 OR5H15A6NDH6 313 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 M0R3H8 397 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 CDK2AP1O14519 115 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 MGRN1O60291 552 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 GKN3PP0CG01 181 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 B3GALT5-AS1P59052 145 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 EPS8Q12929 822 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 ZNHIT3Q15649 155 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-207ENST00000471342 HYAL4Q2M3T9 481 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 C6orf163Q5TEZ5 329 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 ANKRD34AQ69YU3 496 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 OPN5Q6U736 354 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 Q6ZS92 163 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 TMEM179BQ7Z7N9 219 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 SULF2Q8IWU5 870 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 CHERPQ8IWX8 916 aaKnown RBP9.01□□□□□ -0.97
SF3A1-207ENST00000471342 GPALPP1Q8IXQ4 340 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 TAGAPQ8N103 731 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 EID3Q8N140 333 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 GATSQ8NAP1 163 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 CLEC1AQ8NC01 280 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 OR4C15Q8NGM1 316 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 OR5M3Q8NGP4 307 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 SLC22A8Q8TCC7 542 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 DUSP19Q8WTR2 217 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 ABHD17AQ96GS6 310 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 NSMCE2Q96MF7 247 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 CNTNAP3BQ96NU0 1288 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 MFRPQ9BY79 579 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 CNTNAP3Q9BZ76 1288 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 ADAM19Q9H013 955 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 IL1RAPQ9NPH3 570 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 EXOSC3Q9NQT5 275 aaKnown RBP9.01□□□□□ -0.97
SF3A1-207ENST00000471342 ARMC1Q9NVT9 282 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 CALML5Q9NZT1 146 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 NKX1-2Q9UD57 310 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-207ENST00000471342 ANGPT4Q9Y264 503 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 CARD8Q9Y2G2 431 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 OR10H1Q9Y4A9 318 aa9.01□□□□□ -0.97
SF3A1-207ENST00000471342 PCNX3Q9H6A9 2034 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 E9PQ18 207 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 G3V3Y1 287 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 SNPHO15079 494 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 NME2P1O60361 137 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 KRT36O76013 467 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 ANGPTL1O95841 491 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 MT-ND1P03886 318 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 DBIP07108 87 aaKnown RBP9□□□□□ -0.97
SF3A1-207ENST00000471342 SP1P08047 785 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 LINGO3P0C6S8 592 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 NME2P22392 152 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 RFX3P48380 749 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 ANXA11P50995 505 aaKnown RBP9□□□□□ -0.97
SF3A1-207ENST00000471342 HMGA2P52926 109 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 RRADP55042 308 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 CLDN15P56746 228 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 TMPRSS3P57727 454 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 SNTA1Q13424 505 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 EFR3AQ14156 821 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 FLOT2Q14254 428 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms