RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 NHSL2Q5HYW2 709 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 C3P1Q6ZMU1 363 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 MTERF4Q7Z6M4 381 aaKnown RBP17.93■□□□□ 0.46
HDAC7-220ENST00000471235 IFNEQ86WN2 208 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 OR5M9Q8NGP3 310 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 PHOSPHO1Q8TCT1 267 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 SH3YL1Q96HL8 342 aaPredicted RBP17.93■□□□□ 0.46
HDAC7-220ENST00000471235 TRNT1Q96Q11 434 aaKnown RBP17.93■□□□□ 0.46
HDAC7-220ENST00000471235 KLHDC3Q9BQ90 382 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 CPPED1Q9BRF8 314 aaPredicted RBP17.93■□□□□ 0.46
HDAC7-220ENST00000471235 UGT2B28Q9BY64 529 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 SLC38A1Q9H2H9 487 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 IKZF5Q9H5V7 419 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 RUBCNLQ9H714 662 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 HHATLQ9HCP6 504 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 P2RX2Q9UBL9 471 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.93■□□□□ 0.46
HDAC7-220ENST00000471235 GMEB1Q9Y692 573 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 CAPN7Q9Y6W3 813 aa17.93■□□□□ 0.46
HDAC7-220ENST00000471235 FBP2O00757 339 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 ZIC3O60481 467 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 UGT2B17O75795 530 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 LDLRP01130 860 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 NR2F1P10589 423 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 BMP2P12643 396 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 BMP7P18075 431 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 HK1P19367 917 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 PPIBP23284 216 aaKnown RBP17.92■□□□□ 0.46
HDAC7-220ENST00000471235 ZNF117Q03924 483 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 CHRNEQ04844 493 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 FADDQ13158 208 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 MAPK14Q16539 360 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 ZNF630Q2M218 657 aaPredicted RBP17.92■□□□□ 0.46
HDAC7-220ENST00000471235 NDUFAF6Q330K2 333 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 AP1ARQ63HQ0 302 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 VASNQ6EMK4 673 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 HMGN2P46Q86SG4 172 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 C10orf111Q8N326 155 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 B4GALNT2Q8NHY0 566 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 TP63Q9H3D4 680 aaPredicted RBP17.92■□□□□ 0.46
HDAC7-220ENST00000471235 PTGES2Q9H7Z7 377 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 FAM53CQ9NYF3 392 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 ARMCX1Q9P291 453 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 ACAD8Q9UKU7 415 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 RPH3AQ9Y2J0 694 aaPredicted RBP17.92■□□□□ 0.46
HDAC7-220ENST00000471235 MEMO1Q9Y316 297 aa17.92■□□□□ 0.46
HDAC7-220ENST00000471235 CACNA1CQ13936 2221 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 SERINC4A6NH21 518 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 H3BNH8 94 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 HCRTR2O43614 444 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 SNX3O60493 162 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 BCHEP06276 602 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 NUDT7P0C024 238 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 MSX1P28360 303 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 ADSLP30566 484 aaPredicted RBP17.91■□□□□ 0.46
HDAC7-220ENST00000471235 GFRA1P56159 465 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 PER3P56645 1201 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 B3GALT5-AS1P59052 145 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 NFYCQ13952 458 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 MAPRE2Q15555 327 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 GXYLT1Q4G148 440 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 WLSQ5T9L3 541 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 LRRC74BQ6ZQY2 392 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 NCCRP1Q6ZVX7 275 aaPredicted RBP17.91■□□□□ 0.46
HDAC7-220ENST00000471235 CPLX4Q7Z7G2 160 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 SNX32Q86XE0 403 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 SSC4DQ8WTU2 575 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 OIT3Q8WWZ8 545 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 CCDC120Q96HB5 630 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 SFXN2Q96NB2 322 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 QRSL1Q9H0R6 528 aaKnown RBP17.91■□□□□ 0.46
HDAC7-220ENST00000471235 L3MBTL1Q9Y468 752 aa17.91■□□□□ 0.46
HDAC7-220ENST00000471235 LRRK2Q5S007 2527 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 SLC22A2O15244 555 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 ACTL6AO96019 429 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 TFPTP0C1Z6 253 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 UBL4AP11441 157 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 RPS4Y1P22090 263 aaKnown RBP17.9■□□□□ 0.46
HDAC7-220ENST00000471235 GCKP35557 465 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 FGFBP1Q14512 234 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 RUNDC3AQ59EK9 446 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 RAET1LQ5VY80 246 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 REP15Q6BDI9 236 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 ZNF585AQ6P3V2 769 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 CBLN3Q6UW01 205 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 ARSKQ6UWY0 536 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 SLC38A5Q8WUX1 472 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 ABTB1Q969K4 478 aaPredicted RBP17.9■□□□□ 0.46
HDAC7-220ENST00000471235 TMEM19Q96HH6 336 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 DMRTA2Q96SC8 542 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 CGREF1Q99674 301 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 TIMP4Q99727 224 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 TRIM8Q9BZR9 551 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 PRDM14Q9GZV8 571 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 A4GALTQ9NPC4 353 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 THUMPD1Q9NXG2 353 aaKnown RBP17.9■□□□□ 0.46
HDAC7-220ENST00000471235 SUCOQ9UBS9 1254 aaKnown RBP17.9■□□□□ 0.46
HDAC7-220ENST00000471235 CORO2BQ9UQ03 480 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 VDAC3Q9Y277 283 aa17.9■□□□□ 0.46
HDAC7-220ENST00000471235 CARD8Q9Y2G2 431 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms