RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SLU7O95391 586 aaKnown RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 HMGN2P05204 90 aaKnown RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 THBDP07204 575 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 NEFHP12036 1026 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 FCGR2AP12318 317 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 FPR1P21462 350 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 LOXP28300 417 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 SERPINB4P48594 390 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 RNF144AP50876 292 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 ZNF41P51814 821 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 CD226Q15762 336 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 Q5PR19 223 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 RNF165Q6ZSG1 346 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 R3HCC1LQ7Z5L2 792 aaKnown RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 LILRA2Q8N149 483 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 COX18Q8N8Q8 333 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 BANPQ8N9N5 519 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 OR7A2PQ8NGA2 310 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 OR6K3Q8NGY3 331 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 OR2W6PQ8NHA6 318 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 OR2V1Q8NHB1 315 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 B4GALNT2Q8NHY0 566 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 AGR3Q8TD06 166 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 TWIST2Q8WVJ9 160 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 ROBO4Q8WZ75 1007 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 JADE3Q92613 823 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 ZBTB8AQ96BR9 441 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 MTERF3Q96E29 417 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 FAM120BQ96EK7 910 aaKnown RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 GMPPAQ96IJ6 420 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 CCL19Q99731 98 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 MECRQ9BV79 373 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 SIRT3Q9NTG7 399 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 ZCCHC3Q9NUD5 404 aaKnown RBP11.89□□□□□ -0.51
CPSF4-210ENST00000469897 GIN1Q9NXP7 522 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 ATP6V1HQ9UI12 483 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 MID2Q9UJV3 735 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 TMED5Q9Y3A6 229 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 SNX8Q9Y5X2 465 aa11.89□□□□□ -0.51
CPSF4-210ENST00000469897 ARHGAP21Q5T5U3 1957 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 ANKHD1Q8IWZ3 2542 aaKnown RBP11.88□□□□□ -0.51
CPSF4-210ENST00000469897 EFNA2O43921 213 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 SS18L1O75177 396 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-210ENST00000469897 SPAG7O75391 227 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 LAMP1P11279 417 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 ZNF17P17021 662 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 ASMTP46597 345 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 PRIM2P49643 509 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 CARD18P57730 90 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 POU6F2P78424 691 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-210ENST00000469897 MLC1Q15049 377 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 PLPPR5Q32ZL2 321 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 EXOSC6Q5RKV6 272 aaKnown RBP11.88□□□□□ -0.51
CPSF4-210ENST00000469897 HBMQ6B0K9 141 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 STAC2Q6ZMT1 411 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 LRRC75A-AS1Q8N1F1 130 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 CDS1Q92903 461 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 PERPQ96FX8 193 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 BTBD2Q9BX70 525 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 PIGUQ9H490 435 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 EML4Q9HC35 981 aaKnown RBP11.88□□□□□ -0.51
CPSF4-210ENST00000469897 HHATLQ9HCP6 504 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 PAQR5Q9NXK6 330 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-210ENST00000469897 SLC17A7Q9P2U7 560 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 MCTS1Q9ULC4 181 aaKnown RBP11.88□□□□□ -0.51
CPSF4-210ENST00000469897 KCNE3Q9Y6H6 103 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 MED12Q93074 2177 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 VPS13CQ709C8 3753 aa11.88□□□□□ -0.51
CPSF4-210ENST00000469897 A0A1W2PQD3 144 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 C7orf72A4D263 438 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 TMEM114B3SHH9 223 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 SMAD7O15105 426 aaKnown RBP11.87□□□□□ -0.51
CPSF4-210ENST00000469897 OIP5O43482 229 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 NPHS1O60500 1241 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 NTN1O95631 604 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 LY6G6DO95868 133 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 PLAUP00749 431 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 LINGO3P0C6S8 592 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 ME2P23368 584 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 SHC1P29353 583 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 LCN1P31025 176 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 CCT3P49368 545 aaKnown RBP11.87□□□□□ -0.51
CPSF4-210ENST00000469897 LASP1Q14847 261 aaKnown RBP11.87□□□□□ -0.51
CPSF4-210ENST00000469897 KLHL26Q53HC5 615 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 PDSS1Q5T2R2 415 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 IL23RQ5VWK5 629 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 GTF2IRD2BQ6EKJ0 949 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 ALKBH2Q6NS38 261 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 CBLN3Q6UW01 205 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 ZCCHC23Q6ZST2 131 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 ESPNLQ6ZVH7 1005 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 YTHDF3Q7Z739 585 aaKnown RBP11.87□□□□□ -0.51
CPSF4-210ENST00000469897 GTF2IRD2Q86UP8 949 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 TRABD2AQ86V40 505 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 MISPQ8IVT2 679 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 PHOSPHO1Q8TCT1 267 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 ADAMTS15Q8TE58 950 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 OR5P2Q8WZ92 322 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 APOPT1Q96IL0 206 aa11.87□□□□□ -0.51
CPSF4-210ENST00000469897 PPP3R2Q96LZ3 170 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms