RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 RAE1P78406 368 aaKnown RBP11.56□□□□□ -0.56
USP11-206ENST00000469080 LSM11P83369 360 aaKnown RBP eCLIP11.56□□□□□ -0.56
USP11-206ENST00000469080 CHAF1BQ13112 559 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 RBMS2Q15434 407 aaKnown RBP11.56□□□□□ -0.56
USP11-206ENST00000469080 COL28A1Q2UY09 1125 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 AMZ1Q400G9 498 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 TMEM196Q5HYL7 178 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 KANSL1Q7Z3B3 1105 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 LAX1Q8IWV1 398 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 MS4A15Q8N5U1 240 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 PHOSPHO2Q8TCD6 241 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 NIPSNAP1Q9BPW8 284 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 PDCD10Q9BUL8 212 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 TCEAL2Q9H3H9 227 aaPredicted RBP11.56□□□□□ -0.56
USP11-206ENST00000469080 GPR83Q9NYM4 423 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 ZNF282Q9UDV7 671 aaPredicted RBP11.56□□□□□ -0.56
USP11-206ENST00000469080 TBC1D29Q9UFV1 150 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 SLC9A8Q9Y2E8 581 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 GPR52Q9Y2T5 361 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 TEX13CA0A0J9YWL9 993 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 C2orf74A8MZ97 194 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 PDCD5O14737 125 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 STSP08842 583 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 NTSR1P30989 418 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 SLC35A2P78381 396 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 DEFA6Q01524 100 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 GPR149Q86SP6 731 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 SLC34A3Q8N130 599 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 SFT2D1Q8WV19 159 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 NSMAFQ92636 917 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 HHIPQ96QV1 700 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 TBX5Q99593 518 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 TREX2Q9BQ50 279 aaPredicted RBP11.56□□□□□ -0.56
USP11-206ENST00000469080 CMSS1Q9BQ75 279 aaKnown RBP11.56□□□□□ -0.56
USP11-206ENST00000469080 A3GALT2U3KPV4 340 aa11.56□□□□□ -0.56
USP11-206ENST00000469080 IGLV3-16A0A075B6K0 115 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 MFSD2BA6NFX1 497 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 SPINT1O43278 529 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 HBQ1P09105 142 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 ACAA1P09110 424 aaPredicted RBP11.55□□□□□ -0.56
USP11-206ENST00000469080 PRG2P13727 222 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 S100PP25815 95 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 PPP2R1BP30154 601 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 WNT3P56703 355 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 TAS2R38P59533 333 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 RPP30P78346 268 aaKnown RBP11.55□□□□□ -0.56
USP11-206ENST00000469080 ACY1Q03154 408 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 FCN2Q15485 313 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 PIP5KL1Q5T9C9 394 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 TRIQKQ629K1 86 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 CPZQ66K79 652 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 PAQR7Q86WK9 346 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 PTOV1Q86YD1 416 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 DMRTC2Q8IXT2 367 aaPredicted RBP11.55□□□□□ -0.56
USP11-206ENST00000469080 OR8D4Q8NGM9 314 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 DIRAS2Q96HU8 199 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 ZNF514Q96K75 400 aaPredicted RBP11.55□□□□□ -0.56
USP11-206ENST00000469080 CMTM3Q96MX0 182 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 MED18Q9BUE0 208 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 NTNG1Q9Y2I2 539 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 KCNE1BA0A087WTH5 132 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 C17orf113A0A1B0GUU1 675 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 OR2A25A4D2G3 310 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 FABP12A6NFH5 140 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 MYF5P13349 255 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 COL9A1P20849 921 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 DNAJA1P31689 397 aaKnown RBP11.55□□□□□ -0.56
USP11-206ENST00000469080 MAP2K3P46734 347 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 PRSS53Q2L4Q9 553 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 COQ5Q5HYK3 327 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 ZNF691Q5VV52 312 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 ARMC6Q6NXE6 501 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 C8orf82Q6P1X6 216 aaPredicted RBP11.55□□□□□ -0.56
USP11-206ENST00000469080 TMEM88Q6PEY1 159 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 RBMS3Q6XE24 437 aaKnown RBP11.55□□□□□ -0.56
USP11-206ENST00000469080 NUDT13Q86X67 352 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 PTRH1Q86Y79 214 aaKnown RBP11.55□□□□□ -0.56
USP11-206ENST00000469080 ETFBKMTQ8IXQ9 262 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 SETD9Q8NE22 299 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 OR56A3Q8NH54 315 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 UBE2E3Q969T4 207 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 RGMAQ96B86 450 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 LRIG1Q96JA1 1093 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 RBP7Q96R05 134 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 SNTG1Q9NSN8 517 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 SOHLH2Q9NX45 425 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 BABAM2Q9NXR7 383 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 PADI2Q9Y2J8 665 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 CBY1Q9Y3M2 126 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 DNASE2O00115 360 aaPredicted RBP11.55□□□□□ -0.56
USP11-206ENST00000469080 TXNL1O43396 289 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 ORC5O43913 435 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 B4GALT2O60909 372 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 ARSBP15848 533 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 CHMP24386 653 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 MVKQ03426 396 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 SMAD4Q13485 552 aaKnown RBP11.55□□□□□ -0.56
USP11-206ENST00000469080 SLC35F1Q5T1Q4 408 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 PDZD3Q86UT5 571 aa11.55□□□□□ -0.56
USP11-206ENST00000469080 LINC01555Q8NAE3 123 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms