RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 HCAR1Q9BXC0 346 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 RAB33BQ9H082 229 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 PNNQ9H307 717 aaKnown RBP3.91□□□□□ -1.78
LSM5-209ENST00000468872 RHOJQ9H4E5 214 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 RIBC2Q9H4K1 309 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 DHX33Q9H6R0 707 aaKnown RBP3.91□□□□□ -1.78
LSM5-209ENST00000468872 POLD4Q9HCU8 107 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.91□□□□□ -1.78
LSM5-209ENST00000468872 IMPAD1Q9NX62 359 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 ELOVL2Q9NXB9 296 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 GALPQ9UBC7 116 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 BRWD3Q6RI45 1802 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 CHD8Q9HCK8 2581 aa3.9□□□□□ -1.78
LSM5-209ENST00000468872 DISP2A7MBM2 1401 aa3.9□□□□□ -1.78
LSM5-209ENST00000468872 A0A087WWV3 80 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 TRIM49BA6NDI0 452 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 FAM74A7A6NL05 159 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 CTAGE5O15320 804 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 RHBDL1O75783 438 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 PRAMEF12O95522 483 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 UMPSP11172 480 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 PAX7P23759 505 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 KIF5BP33176 963 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 ALDH3B2P48448 385 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 EMDP50402 254 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 SNTB2Q13425 540 aaKnown RBP3.9□□□□□ -1.79
LSM5-209ENST00000468872 RUNX3Q13761 415 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 HIGD2BQ4VC39 106 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 FAM74A3Q4VXF1 159 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 CES3Q6UWW8 571 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 LANCL3Q6ZV70 420 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 ERICH1Q86X53 443 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 GMCL1P1Q8NEA9 526 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 IPMKQ8NFU5 416 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 OSTF1Q92882 214 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 AKR1E2Q96JD6 320 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 TM2D1Q9BX74 207 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 NFKBIZQ9BYH8 718 aa3.9□□□□□ -1.79
LSM5-209ENST00000468872 POLR3FQ9H1D9 316 aaPredicted RBP3.9□□□□□ -1.79
LSM5-209ENST00000468872 EXOSC3Q9NQT5 275 aaKnown RBP3.9□□□□□ -1.79
LSM5-209ENST00000468872 AHDC1Q5TGY3 1603 aaPredicted RBP3.9□□□□□ -1.79
LSM5-209ENST00000468872 COL5A2P05997 1499 aaPredicted RBP3.9□□□□□ -1.79
LSM5-209ENST00000468872 SPTBN5Q9NRC6 3674 aaKnown RBP3.89□□□□□ -1.79
LSM5-209ENST00000468872 CNTLNQ9NXG0 1405 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 ABCA9Q8IUA7 1624 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 EFCAB7A8K855 629 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 G3V3Y1 287 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 EFNA2O43921 213 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 GPRIN2O60269 458 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 STX11O75558 287 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 NEBLO76041 1014 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 UFL1O94874 794 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 GJB5O95377 273 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 SLC2A10O95528 541 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 OPN1LWP04000 364 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 CT45A10P0DMU9 189 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 H2AFXP16104 143 aaPredicted RBP3.89□□□□□ -1.79
LSM5-209ENST00000468872 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 ADSSP30520 456 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 ACVR1BP36896 505 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 NOVA1P51513 510 aaKnown RBP3.89□□□□□ -1.79
LSM5-209ENST00000468872 SLC8A3P57103 927 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 CNTN2Q02246 1040 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 PAX2Q02962 417 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 MAPK6Q16659 721 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 CCDC57Q2TAC2 916 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 SLC36A3Q495N2 470 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 NADK2Q4G0N4 442 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 CELF3Q5SZQ8 465 aaKnown RBP3.89□□□□□ -1.79
LSM5-209ENST00000468872 ZNF57Q68EA5 555 aaPredicted RBP3.89□□□□□ -1.79
LSM5-209ENST00000468872 GCNT7Q6ZNI0 430 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 DPY19L4Q7Z388 723 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 ANKRD37Q7Z713 158 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 ZDHHC21Q8IVQ6 265 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 BPIFB2Q8N4F0 458 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.89□□□□□ -1.79
LSM5-209ENST00000468872 M1APQ8TC57 530 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 VN1R17PQ8TDU5 208 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 AGAP11Q8TF27 550 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 FOXN4Q96NZ1 517 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 APOL2Q9BQE5 337 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 FEM1AQ9BSK4 669 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 MEAF6Q9HAF1 191 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 RPS10P5Q9NQ39 176 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 FARSBQ9NSD9 589 aaKnown RBP3.89□□□□□ -1.79
LSM5-209ENST00000468872 CUTCQ9NTM9 273 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 SLC2A6Q9UGQ3 507 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 CYTH4Q9UIA0 394 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 TMCC3Q9ULS5 477 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 SMC3Q9UQE7 1217 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 GMPPBQ9Y5P6 360 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 IQGAP1P46940 1657 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 ABCC1P33527 1531 aa3.89□□□□□ -1.79
LSM5-209ENST00000468872 ADAMTS7Q9UKP4 1686 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 PPIAL4CA0A0B4J2A2 164 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 CLDN5O00501 218 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 SLC17A2O00624 439 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 CPLX1O14810 134 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 XPO1O14980 1071 aaKnown RBP3.88□□□□□ -1.79
LSM5-209ENST00000468872 TM7SF2O76062 418 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms