RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 KRTCAP2Q8N6L1 136 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 OR5P2Q8WZ92 322 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 PKNOX2Q96KN3 472 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 ALPK1Q96QP1 1244 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 PRPF18Q99633 342 aaKnown RBP19.58■□□□□ 0.72
TTC28-204ENST00000468807 NPAS1Q99742 590 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 SLC39A3Q9BRY0 314 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 MED18Q9BUE0 208 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 BTBD2Q9BX70 525 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 TMEM185BQ9H7F4 350 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 PLEKHF2Q9H8W4 249 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 MED17Q9NVC6 651 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 C6orf203Q9P0P8 240 aaPredicted RBP19.58■□□□□ 0.72
TTC28-204ENST00000468807 FAF1Q9UNN5 650 aaPredicted RBP19.58■□□□□ 0.72
TTC28-204ENST00000468807 PROCRQ9UNN8 238 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 TESMINQ9Y4I5 508 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 WDR91A4D1P6 747 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 LYPLA1O75608 230 aaPredicted RBP19.57■□□□□ 0.72
TTC28-204ENST00000468807 AQP8O94778 261 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 ATE1O95260 518 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 HSPA4LO95757 839 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 C6orf47O95873 294 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 KLK2P20151 261 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 CCT3P49368 545 aaKnown RBP19.57■□□□□ 0.72
TTC28-204ENST00000468807 FGFBP1Q14512 234 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 EXOC3L2Q2M3D2 409 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 KRT71Q3SY84 523 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 NUDCD3Q8IVD9 361 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 MISPQ8IVT2 679 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 ZNF610Q8N9Z0 462 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 B4GALNT2Q8NHY0 566 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 ADAMTS15Q8TE58 950 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 CAVIN3Q969G5 261 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 ZBTB8AQ96BR9 441 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 PPP1R36Q96LQ0 422 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 RNF145Q96MT1 663 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 CXorf36Q9H7Y0 433 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 CLEC4AQ9UMR7 237 aa19.57■□□□□ 0.72
TTC28-204ENST00000468807 NPIPA5A0A0B4J1W7 369 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 NPIPA7E9PJI5 369 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 NPIPA8P0DM63 369 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 ME2P23368 584 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 LCN1P31025 176 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 SOAT1P35610 550 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 SLC6A8P48029 635 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 CD226Q15762 336 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 PDCD2Q16342 344 aaPredicted RBP19.56■□□□□ 0.72
TTC28-204ENST00000468807 DEFB113Q30KQ7 82 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 PLPPR5Q32ZL2 321 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 LSM12Q3MHD2 195 aaKnown RBP19.56■□□□□ 0.72
TTC28-204ENST00000468807 CDC73Q6P1J9 531 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 GTPBP8Q8N3Z3 284 aaPredicted RBP19.56■□□□□ 0.72
TTC28-204ENST00000468807 OR56A1Q8NGH5 318 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 OR10D3Q8NH80 312 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 OR5AK3PQ8NH89 298 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 PHOSPHO1Q8TCT1 267 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 MBD6Q96DN6 1003 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 ZC3HAV1LQ96H79 300 aaKnown RBP19.56■□□□□ 0.72
TTC28-204ENST00000468807 WFIKKN1Q96NZ8 548 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 STACQ99469 402 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 TMUB1Q9BVT8 246 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 PIGUQ9H490 435 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 DUSP22Q9NRW4 184 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 ELOVL5Q9NYP7 299 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 ZNF226Q9NYT6 803 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 MCTS1Q9ULC4 181 aaKnown RBP19.56■□□□□ 0.72
TTC28-204ENST00000468807 EMC9Q9Y3B6 208 aa19.56■□□□□ 0.72
TTC28-204ENST00000468807 FLNAP21333 2647 aaKnown RBP19.55■□□□□ 0.72
TTC28-204ENST00000468807 ACANP16112 2415 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 TNFSF11O14788 317 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 TYROBPO43914 113 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 SYNGR4O95473 234 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 NUDT14O95848 222 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 G6PDP11413 515 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 PRPS1L1P21108 318 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 UGT2B10P36537 528 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 CTBP2P56545 445 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 PGS1Q32NB8 556 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 WDR93Q6P2C0 686 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 FAM214BQ7L5A3 538 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 ZNF550Q7Z398 422 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 NATD1Q8N6N6 113 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 ZNF614Q8N883 585 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 ZNF527Q8NB42 609 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 ACTRT2Q8TDY3 377 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 KLHDC3Q9BQ90 382 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 ACTRT3Q9BYD9 372 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 KLHL4Q9C0H6 718 aa19.55■□□□□ 0.72
TTC28-204ENST00000468807 A0A1W2PPR1 153 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 C16orf97H3BN30 126 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 RGS16O15492 202 aaPredicted RBP19.54■□□□□ 0.72
TTC28-204ENST00000468807 CTIFO43310 598 aaKnown RBP19.54■□□□□ 0.72
TTC28-204ENST00000468807 CXCL13O43927 109 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 CGAP01215 116 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 KRT16P08779 473 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 CD8BP10966 210 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 ETV4P43268 484 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 OCRLQ01968 901 aa19.54■□□□□ 0.72
TTC28-204ENST00000468807 FOXD4Q12950 439 aaPredicted RBP19.54■□□□□ 0.72
TTC28-204ENST00000468807 CHI3L2Q15782 390 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms