RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ATP6V1HQ9UI12 483 aa21.94■■□□□ 1.1
PTCH1-210ENST00000468211 A0A087WZY1 265 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 CXCL13O43927 109 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 LAMP1P11279 417 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 FCGR2AP12318 317 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 IL11P20809 199 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 ASMTP46597 345 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 RNF144AP50876 292 aaPredicted RBP21.93■■□□□ 1.1
PTCH1-210ENST00000468211 FGFBP1Q14512 234 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 WDR75Q8IWA0 830 aaKnown RBP21.93■■□□□ 1.1
PTCH1-210ENST00000468211 COX18Q8N8Q8 333 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 JADE3Q92613 823 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 NSD1Q96L73 2696 aaPredicted RBP21.93■■□□□ 1.1
PTCH1-210ENST00000468211 C3orf30Q96M34 536 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 PRRG4Q9BZD6 226 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 KLHL4Q9C0H6 718 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 IQCGQ9H095 443 aaKnown RBP21.93■■□□□ 1.1
PTCH1-210ENST00000468211 PLSCR4Q9NRQ2 329 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 UBQLN4Q9NRR5 601 aa21.93■■□□□ 1.1
PTCH1-210ENST00000468211 ZCCHC3Q9NUD5 404 aaKnown RBP21.93■■□□□ 1.1
PTCH1-210ENST00000468211 FREM1Q5H8C1 2179 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 A0A0J9YW62 118 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 C7orf72A4D263 438 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 TNFSF11O14788 317 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 SCAMP2O15127 329 aaKnown RBP21.92■■□□□ 1.1
PTCH1-210ENST00000468211 OIP5O43482 229 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 NPHS1O60500 1241 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 SPAG7O75391 227 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 HMGN2P05204 90 aaKnown RBP21.92■■□□□ 1.1
PTCH1-210ENST00000468211 THBDP07204 575 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 LASP1Q14847 261 aaKnown RBP21.92■■□□□ 1.1
PTCH1-210ENST00000468211 MLC1Q15049 377 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 XKR7Q5GH72 579 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 CPTPQ5TA50 214 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 ZCCHC12Q6PEW1 402 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 ACTRT2Q8TDY3 377 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 CDS1Q92903 461 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 C18orf12Q96KH6 178 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 UBTD1Q9HAC8 227 aa21.92■■□□□ 1.1
PTCH1-210ENST00000468211 NPIPA5A0A0B4J1W7 369 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 NPIPA7E9PJI5 369 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 ADAMDEC1O15204 470 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 PEX11AO75192 247 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 NPIPA8P0DM63 369 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 SHC1P29353 583 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 PRIM2P49643 509 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 RAC1P63000 192 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 POU6F2P78424 691 aaPredicted RBP21.91■■□□□ 1.1
PTCH1-210ENST00000468211 PTGR1Q14914 329 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 ACKR1Q16570 336 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 R3HCC1LQ7Z5L2 792 aaKnown RBP21.91■■□□□ 1.1
PTCH1-210ENST00000468211 OR6K3Q8NGY3 331 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 OR2V1Q8NHB1 315 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 ZBTB8AQ96BR9 441 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 GMPPAQ96IJ6 420 aaPredicted RBP21.91■■□□□ 1.1
PTCH1-210ENST00000468211 C1orf50Q9BV19 199 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 BTBD2Q9BX70 525 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 ANKZF1Q9H8Y5 726 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 L2HGDHQ9H9P8 463 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 KCNE3Q9Y6H6 103 aa21.91■■□□□ 1.1
PTCH1-210ENST00000468211 A0A1W2PQD3 144 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 SCDO00767 359 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 EFNA2O43921 213 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 SS18L1O75177 396 aaPredicted RBP21.9■■□□□ 1.1
PTCH1-210ENST00000468211 LINGO3P0C6S8 592 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 LCN1P31025 176 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 HPCAL1P37235 193 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 SERPINB4P48594 390 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 ZNF41P51814 821 aaPredicted RBP21.9■■□□□ 1.1
PTCH1-210ENST00000468211 Q5PR19 223 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 SHEQ5VZ18 495 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 LRIG3Q6UXM1 1119 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 BIVMQ86UB2 503 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 PIP5K1AQ99755 562 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 PIGUQ9H490 435 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 CXorf36Q9H7Y0 433 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 GIN1Q9NXP7 522 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 STOML1Q9UBI4 398 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 EMC9Q9Y3B6 208 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 SNX8Q9Y5X2 465 aa21.9■■□□□ 1.1
PTCH1-210ENST00000468211 SLU7O95391 586 aaKnown RBP21.89■■□□□ 1.09
PTCH1-210ENST00000468211 PLGP00747 810 aaPredicted RBP21.89■■□□□ 1.09
PTCH1-210ENST00000468211 INHBBP09529 407 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 HPGDP15428 266 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 CREB1P16220 341 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 CTBP2P56545 445 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 ZNF117Q03924 483 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 C6orf136Q5SQH8 315 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 CBLN3Q6UW01 205 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 STAC2Q6ZMT1 411 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 KRTCAP2Q8N6L1 136 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 B4GALNT2Q8NHY0 566 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 TCP10LQ8TDR4 215 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 CHMP6Q96FZ7 201 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 PPP3R2Q96LZ3 170 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 STACQ99469 402 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 DUSP22Q9NRW4 184 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 ZDHHC2Q9UIJ5 367 aa21.89■■□□□ 1.09
PTCH1-210ENST00000468211 MCTS1Q9ULC4 181 aaKnown RBP21.89■■□□□ 1.09
PTCH1-210ENST00000468211 TMEM114B3SHH9 223 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms