RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 TREX2Q9BQ50 279 aaPredicted RBP10.12□□□□□ -0.79
PRPF3-203ENST00000467514 VKORC1Q9BQB6 163 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 UTP23Q9BRU9 249 aaKnown RBP10.12□□□□□ -0.79
PRPF3-203ENST00000467514 PELOQ9BRX2 385 aaKnown RBP10.12□□□□□ -0.79
PRPF3-203ENST00000467514 KLHL4Q9C0H6 718 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 IL1RAPQ9NPH3 570 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 MKKSQ9NPJ1 570 aaPredicted RBP10.12□□□□□ -0.79
PRPF3-203ENST00000467514 C14orf105Q9NVL8 296 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 GIN1Q9NXP7 522 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 ANKRD10Q9NXR5 420 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 P2RX2Q9UBL9 471 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 CNOT11Q9UKZ1 510 aaKnown RBP10.12□□□□□ -0.79
PRPF3-203ENST00000467514 EDARQ9UNE0 448 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 LIPT1Q9Y234 373 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 ZNF835Q9Y2P0 537 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 GPC6Q9Y625 555 aaPredicted RBP10.12□□□□□ -0.79
PRPF3-203ENST00000467514 V9GYQ6 96 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 ABCA4P78363 2273 aa10.12□□□□□ -0.79
PRPF3-203ENST00000467514 DSPPQ9NZW4 1301 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 TCRBV16S1A1N1A0A5B0 115 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 NKX2-6A6NCS4 301 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 PRAMEF25A6NGN4 478 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 ACOX3O15254 700 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 CLOCKO15516 846 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 ZNHIT1O43257 154 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 OR10H2O60403 315 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 TPST1O60507 370 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 CDC123O75794 336 aaPredicted RBP10.11□□□□□ -0.79
PRPF3-203ENST00000467514 MFN2O95140 757 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 ZNF682O95780 498 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 MT-ND1P03886 318 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 CLPSP04118 112 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 BCHEP06276 602 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 TPOP07202 933 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 ZNF24P17028 368 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 HSF1Q00613 529 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 STX4Q12846 297 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 FOXD4Q12950 439 aaPredicted RBP10.11□□□□□ -0.79
PRPF3-203ENST00000467514 EXOSC7Q15024 291 aaKnown RBP10.11□□□□□ -0.79
PRPF3-203ENST00000467514 DUSP5Q16690 384 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 BTBD16Q32M84 506 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 SFT2D3Q587I9 215 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 CMPK2Q5EBM0 449 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 RPS26P11Q5JNZ5 115 aaPredicted RBP10.11□□□□□ -0.79
PRPF3-203ENST00000467514 FCRLBQ6BAA4 426 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 Q71RC1 249 aaPredicted RBP10.11□□□□□ -0.79
PRPF3-203ENST00000467514 FKBP9P1Q75LS8 142 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 SZRD1Q7Z422 152 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 LAPTM4BQ86VI4 370 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 EPHX4Q8IUS5 362 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 GALNT12Q8IXK2 581 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 BEST3Q8N1M1 668 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 SLC16A11Q8NCK7 471 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 PLPP5Q8NEB5 264 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 C7orf57Q8NEG2 295 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 GPR32P1Q8NGA4 272 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 OR10Q1Q8NGQ4 319 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 BBS10Q8TAM1 723 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 DOK4Q8TEW6 326 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 PTPMT1Q8WUK0 201 aaPredicted RBP10.11□□□□□ -0.79
PRPF3-203ENST00000467514 XAGE5Q8WWM1 108 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 ASB5Q8WWX0 329 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 RIT1Q92963 219 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 OTUB1Q96FW1 271 aaPredicted RBP10.11□□□□□ -0.79
PRPF3-203ENST00000467514 ZNF354BQ96LW1 612 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 VSTM2LQ96N03 204 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 YIPF4Q9BSR8 244 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 DOHHQ9BU89 302 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 SLC38A1Q9H2H9 487 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 PIGUQ9H490 435 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 YY1AP1Q9H869 796 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 SLC24A3Q9HC58 644 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 KCNJ16Q9NPI9 418 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 DUSP22Q9NRW4 184 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 DNAJB12Q9NXW2 375 aaKnown RBP10.11□□□□□ -0.79
PRPF3-203ENST00000467514 TNFRSF10DQ9UBN6 386 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 C15orf41Q9Y2V0 281 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 PRRC2AP48634 2157 aaKnown RBP10.11□□□□□ -0.79
PRPF3-203ENST00000467514 ACANP16112 2415 aa10.11□□□□□ -0.79
PRPF3-203ENST00000467514 A0A0G2JPF8 293 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 DUXAA6NLW8 204 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 HNRNPCL2B2RXH8 293 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 HNRNPCL3B7ZW38 293 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 H0YJX3 145 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 HRKO00198 91 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 CDC40O60508 579 aaKnown RBP eCLIP10.1□□□□□ -0.79
PRPF3-203ENST00000467514 DEAF1O75398 565 aaPredicted RBP10.1□□□□□ -0.79
PRPF3-203ENST00000467514 SEC24DO94855 1032 aaPredicted RBP10.1□□□□□ -0.79
PRPF3-203ENST00000467514 NKX2-2O95096 273 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 AGR2O95994 175 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 IFNA14P01570 189 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 GUSBP08236 651 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 HNRNPCL4P0DMR1 293 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 ETS2P15036 469 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 DNASE1P24855 282 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 KCNJ5P48544 419 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 EMDP50402 254 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 ST13P50502 369 aaKnown RBP10.1□□□□□ -0.79
PRPF3-203ENST00000467514 VLDLRP98155 873 aa10.1□□□□□ -0.79
PRPF3-203ENST00000467514 LTBQ06643 244 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms