RNA–Protein interactions for RNA: ENST00000467411.5

CDCA7-206, Transcript of cell division cycle associated 7, humanhuman

TSL 1 (best)

Gene CDCA7, Length 3,176 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-206ENST00000467411 CDC42P60953 191 aa9.41□□□□□ -0.9
CDCA7-206ENST00000467411 TARDBPQ13148 414 aaKnown RBP eCLIP9.41□□□□□ -0.9
CDCA7-206ENST00000467411 SGCDQ92629 289 aa9.41□□□□□ -0.9
CDCA7-206ENST00000467411 DAZLQ92904 295 aaKnown RBP9.41□□□□□ -0.9
CDCA7-206ENST00000467411 UBE2FQ969M7 185 aa9.41□□□□□ -0.9
CDCA7-206ENST00000467411 HSPBAP1Q96EW2 488 aa9.41□□□□□ -0.9
CDCA7-206ENST00000467411 HS6ST2Q96MM7 605 aa9.41□□□□□ -0.9
CDCA7-206ENST00000467411 C12orf10Q9HB07 376 aa9.41□□□□□ -0.9
CDCA7-206ENST00000467411 PTTG2Q9NZH5 202 aa9.41□□□□□ -0.9
CDCA7-206ENST00000467411 SLC13A4Q9UKG4 626 aa9.41□□□□□ -0.9
CDCA7-206ENST00000467411 RARRES3Q9UL19 164 aa9.41□□□□□ -0.9
CDCA7-206ENST00000467411 OR2W5A6NFC9 320 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 A8MU76 341 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 B4E171 279 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 ADAM11O75078 769 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 ZGLP1P0C6A0 271 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 PRG2P13727 222 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 IFNA8P32881 189 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 MPLP40238 635 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 TSPAN7P41732 249 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 GRK6P43250 576 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 TMBIM6P55061 237 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 DCDP81605 110 aaKnown RBP9.4□□□□□ -0.9
CDCA7-206ENST00000467411 EMX1Q04741 257 aaPredicted RBP9.4□□□□□ -0.9
CDCA7-206ENST00000467411 FHL1Q13642 323 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 COL9A2Q14055 689 aaPredicted RBP9.4□□□□□ -0.9
CDCA7-206ENST00000467411 PDZK1Q5T2W1 519 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 ARHGAP40Q5TG30 622 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 ZNF550Q7Z398 422 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 GPR141Q7Z602 305 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 ANKRD37Q7Z713 158 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 HMGN2P46Q86SG4 172 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 GFM1Q96RP9 751 aaKnown RBP9.4□□□□□ -0.9
CDCA7-206ENST00000467411 NUDT9Q9BW91 350 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 CDCA4Q9BXL8 241 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 MED17Q9NVC6 651 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 IRAK4Q9NWZ3 460 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 SCN3BQ9NY72 215 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 FLRT3Q9NZU0 649 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 SLC7A7Q9UM01 511 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 LOC102723996A0A087X1L8 192 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 SERINC4A6NH21 518 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 H3BSA7 217 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 FLRT2O43155 660 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 FRS3O43559 492 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 CDK1P06493 297 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 ALAS2P22557 587 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 LSM11P83369 360 aaKnown RBP eCLIP9.4□□□□□ -0.96e-6■■□□□ 12.1
CDCA7-206ENST00000467411 VWA2Q5GFL6 755 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 SNAP47Q5SQN1 464 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 PLEKHM3Q6ZWE6 761 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 PIGXQ8TBF5 258 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 DOK4Q8TEW6 326 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 LIPHQ8WWY8 451 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 GGHQ92820 318 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 NTNG2Q96CW9 530 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 MPP4Q96JB8 637 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 TRIM2Q9C040 744 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 RSL24D1Q9UHA3 163 aaKnown RBP9.4□□□□□ -0.9
CDCA7-206ENST00000467411 ICAM5Q9UMF0 924 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 NTNG1Q9Y2I2 539 aa9.4□□□□□ -0.9
CDCA7-206ENST00000467411 SAGE2PA6NJ88 616 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 DYRK3O43781 588 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 SCRG1O75711 98 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 TSPAN19P0C672 248 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 FMO3P31513 532 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 GAS1P54826 345 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 GP2P55259 537 aaKnown RBP9.4□□□□□ -0.91
CDCA7-206ENST00000467411 TPD52P55327 224 aaPredicted RBP9.4□□□□□ -0.91
CDCA7-206ENST00000467411 TBCEQ15813 527 aaPredicted RBP9.4□□□□□ -0.91
CDCA7-206ENST00000467411 NKAIN1Q4KMZ8 207 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 FAM81AQ8TBF8 368 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 STT3BQ8TCJ2 826 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 TMEM255BQ8WV15 326 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 YIPF6Q96EC8 236 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 WDR77Q9BQA1 342 aaPredicted RBP9.4□□□□□ -0.91
CDCA7-206ENST00000467411 PRR14Q9BWN1 585 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 WWTR1Q9GZV5 400 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 KRCC1Q9NPI7 259 aaPredicted RBP9.4□□□□□ -0.91
CDCA7-206ENST00000467411 ERVK-18Q9QC07 812 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 CTSFQ9UBX1 484 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 RP1P56715 2156 aa9.4□□□□□ -0.91
CDCA7-206ENST00000467411 XPNPEP2O43895 674 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 CBFA2T3O75081 653 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 CNOT3O75175 753 aaKnown RBP9.39□□□□□ -0.91
CDCA7-206ENST00000467411 PTP4A3O75365 173 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 GIPRP48546 466 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 MASP1P48740 699 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 LIMK1P53667 647 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 SKP2Q13309 424 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 SMN1Q16637 294 aaKnown RBP9.39□□□□□ -0.91
CDCA7-206ENST00000467411 MEDAGQ5VYS4 303 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 ZNF620Q6ZNG0 422 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 LAPTM4BQ86VI4 370 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 PPP1R3BQ86XI6 285 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 BPIFB6Q8NFQ5 453 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 OR8J1Q8NGP2 316 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 OR2I1PQ8NGU4 316 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 NUBPLQ8TB37 319 aa9.39□□□□□ -0.91
CDCA7-206ENST00000467411 CNOT9Q92600 299 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms