RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ZNF556Q9HAH1 456 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 ANGPT4Q9Y264 503 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 TESMINQ9Y4I5 508 aa17.25■□□□□ 0.35
CAPN3-209ENST00000466222 CLPSP04118 112 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 HEXBP07686 556 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 ARAFP10398 606 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 ACP2P11117 423 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 BMP4P12644 408 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 CD40LGP29965 261 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 EMDP50402 254 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 SPIBQ01892 262 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 DUSP5Q16690 384 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 FAM198BQ6UWH4 519 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 CRELD1Q96HD1 420 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 RHNO1Q9BSD3 238 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 ACTRT3Q9BYD9 372 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 SEC16AO15027 2179 aa17.24■□□□□ 0.35
CAPN3-209ENST00000466222 SERPINB7O75635 380 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 LCKP06239 509 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 CSRP1P21291 193 aaKnown RBP17.23■□□□□ 0.35
CAPN3-209ENST00000466222 CLK1P49759 484 aaKnown RBP17.23■□□□□ 0.35
CAPN3-209ENST00000466222 HMGA2P52926 109 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 LSM3P62310 102 aaKnown RBP17.23■□□□□ 0.35
CAPN3-209ENST00000466222 CYP27C1Q4G0S4 372 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 ZNF517Q6ZMY9 492 aaPredicted RBP17.23■□□□□ 0.35
CAPN3-209ENST00000466222 USP43Q70EL4 1123 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 ZNF605Q86T29 641 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 LGI4Q8N135 537 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 SLC5A8Q8N695 610 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 C9orf43Q8TAL5 461 aaPredicted RBP17.23■□□□□ 0.35
CAPN3-209ENST00000466222 PIK3R3Q92569 461 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 CDS1Q92903 461 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 C8orf44Q96CB5 159 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 COL21A1Q96P44 957 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 NEURL2Q9BR09 285 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 OR8D2Q9GZM6 311 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 A4GALTQ9NPC4 353 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 PMF1-BGLAPU3KQ54 211 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 PTPRZ1P23471 2315 aaPredicted RBP17.23■□□□□ 0.35
CAPN3-209ENST00000466222 PCNX2A6NKB5 2137 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 MPZL2O60487 215 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 CHRM4P08173 479 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 KHKP50053 298 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 PPP5CP53041 499 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 NNATQ16517 81 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 CCNJQ5T5M9 372 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 LACC1Q8IV20 430 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 PLPP5Q8NEB5 264 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 SCN2AQ99250 2005 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 PIP5K1AQ99755 562 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 SPRY4Q9C004 299 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 QRSL1Q9H0R6 528 aaKnown RBP17.23■□□□□ 0.35
CAPN3-209ENST00000466222 DCSTAMPQ9H295 470 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 CLCA3PQ9Y6N3 262 aa17.23■□□□□ 0.35
CAPN3-209ENST00000466222 ISPDA4D126 451 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 TAF4O00268 1085 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 SLC28A2O43868 658 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 AIREO43918 545 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 KLF7O75840 302 aaPredicted RBP17.22■□□□□ 0.35
CAPN3-209ENST00000466222 TNFSF15O95150 251 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 DDAH2O95865 285 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 EMP2P54851 167 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 CDH12P55289 794 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 PCBP3P57721 371 aaKnown RBP17.22■□□□□ 0.35
CAPN3-209ENST00000466222 RPS3AP61247 264 aaKnown RBP17.22■□□□□ 0.35
CAPN3-209ENST00000466222 FUT7Q11130 342 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 CDC73Q6P1J9 531 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 ZNF615Q8N8J6 731 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 KBTBD8Q8NFY9 601 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 OR4N2Q8NGD1 307 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 C16orf52Q8NHV5 167 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 MCFD2Q8NI22 146 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 WDR36Q8NI36 951 aaKnown RBP17.22■□□□□ 0.35
CAPN3-209ENST00000466222 ADAMTS15Q8TE58 950 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 GGHQ92820 318 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 UBE2FQ969M7 185 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 ZG16BQ96DA0 208 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 LRFN5Q96NI6 719 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 CRB3Q9BUF7 120 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 OR10A5Q9H207 317 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 SLC26A1Q9H2B4 701 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 DSN1Q9H410 356 aa17.22■□□□□ 0.35
CAPN3-209ENST00000466222 SH3D21A4FU49 640 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 SAGE2PA6NJ88 616 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 FCMRO60667 390 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 ZIC2O95409 532 aaPredicted RBP17.21■□□□□ 0.35
CAPN3-209ENST00000466222 NR2F1P10589 423 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 CEACAM1P13688 526 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 GABRB1P18505 474 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 LIMS1P48059 325 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 CBX3Q13185 183 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 TIGD6Q17RP2 521 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 EXOC3L2Q2M3D2 409 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 ZNF404Q494X3 552 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 TMEM236Q5W0B7 351 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 SLC46A3Q7Z3Q1 461 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 BTLAQ7Z6A9 289 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 ANKRD37Q7Z713 158 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 SLC2A12Q8TD20 617 aa17.21■□□□□ 0.35
CAPN3-209ENST00000466222 TREX2Q9BQ50 279 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 318.4 ms