RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 NUDT9Q9BW91 350 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 SLC38A1Q9H2H9 487 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 ANKRD19PQ9H560 264 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 PIF1Q9H611 641 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 KRCC1Q9NPI7 259 aaPredicted RBP5.55□□□□□ -1.52
CHMP3-206ENST00000466032 MYOTQ9UBF9 498 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 DNAJB9Q9UBS3 223 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 ENOPH1Q9UHY7 261 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 CNOT11Q9UKZ1 510 aaKnown RBP5.55□□□□□ -1.52
CHMP3-206ENST00000466032 AURKCQ9UQB9 309 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 MSRB2Q9Y3D2 182 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 DTNAQ9Y4J8 743 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 NPFFR2Q9Y5X5 522 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 ZNF292O60281 2723 aa5.55□□□□□ -1.52
CHMP3-206ENST00000466032 TRBV11-1A0A0K0K1C0 115 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 A0A1W2PNU3 283 aaPredicted RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 A0A1W2PS29 197 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 SH3PXD2BA1X283 911 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 TRABD2BA6NFA1 517 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 A8MUA0 341 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 ALG1L2C9J202 215 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 H0YJX3 145 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 FAAHO00519 579 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 SOCS6O14544 535 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 AP3D1O14617 1153 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 PRRG2O14669 202 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 CLOCKO15516 846 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 PEX1O43933 1283 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 CNOT3O75175 753 aaKnown RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 REM1O75628 298 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 PPM1BO75688 479 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 DNAJB5O75953 348 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 PRKD3O94806 890 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 CST1P01037 141 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 LDLRP01130 860 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 ATP6V1B2P21281 511 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 FKBP2P26885 142 aaKnown RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 IFNGR2P38484 337 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 CASRP41180 1078 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 RNF144AP50876 292 aaPredicted RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 SSR4P51571 173 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 NR0B1P51843 470 aaKnown RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 UCNP55089 124 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 RPS26P62854 115 aaKnown RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 KCNJ10P78508 379 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 PLCXD2Q0VAA5 305 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 RCN1Q15293 331 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 ATP6AP1Q15904 470 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 MEP1AQ16819 746 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 RFX4Q33E94 735 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 FOXB2Q5VYV0 432 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 FAAH2Q6GMR7 532 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 TYW3Q6IPR3 259 aaKnown RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 LCN10Q6JVE6 187 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 H3F3CQ6NXT2 135 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 C16orf87Q6PH81 154 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 B3GNT6Q6ZMB0 384 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 DGAT2L6Q6ZPD8 337 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 LINC00299Q6ZSB3 139 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 LANCL3Q6ZV70 420 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 ERMP1Q7Z2K6 904 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 PRICKLE2Q7Z3G6 844 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 MRGPREQ86SM8 312 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 RANBP3LQ86VV4 465 aaPredicted RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 RPS19BP1Q86WX3 136 aaKnown RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 HIPK1Q86Z02 1210 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 C9orf40Q8IXQ3 194 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 CLEC4FQ8N1N0 589 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 PQLC1Q8N2U9 271 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 PACRGLQ8N7B6 248 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 BCORP1Q8N888 145 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 ANKFN1Q8N957 763 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 GIMAP1Q8WWP7 306 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 RAB8BQ92930 207 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 MAL2Q969L2 176 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 OTUB1Q96FW1 271 aaPredicted RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 RMND5BQ96G75 393 aaPredicted RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 TPD52L3Q96J77 140 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 HSH2DQ96JZ2 352 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 RDH12Q96NR8 316 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 GAL3ST4Q96RP7 486 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 YIPF4Q9BSR8 244 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 C9orf16Q9BUW7 83 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 CHID1Q9BWS9 393 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 ITPAQ9BY32 194 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 TRIM8Q9BZR9 551 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 TRIM2Q9C040 744 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 LHPPQ9H008 270 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 NXF5Q9H1B4 397 aaKnown RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 SERHL2Q9H4I8 314 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 RUBCNLQ9H714 662 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 EXOSC3Q9NQT5 275 aaKnown RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 P4HTMQ9NXG6 502 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 CNIH4Q9P003 139 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 TESQ9UGI8 421 aaKnown RBP5.54□□□□□ -1.52
CHMP3-206ENST00000466032 POLHQ9Y253 713 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 PCDHGB6Q9Y5F9 930 aa5.54□□□□□ -1.52
CHMP3-206ENST00000466032 LOC101059948A0A1B0GTJ6 334 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 DCDC2BA2VCK2 349 aa5.53□□□□□ -1.52
CHMP3-206ENST00000466032 FAM149AA5PLN7 773 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms