RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 MTCL1Q9Y4B5 1905 aaKnown RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 A0A1B0GUH1 482 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 DAPL1A0PJW8 107 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 TRABD2BA6NFA1 517 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 NAP1L6A6NFF2 107 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 CPSF4LA6NMK7 179 aaKnown RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 KRBOX1C9JBD0 128 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 LEFTY2O00292 366 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 KIAA0355O15063 1070 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SLC2A10O95528 541 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SYPP08247 313 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 ELFN1P0C7U0 828 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 RAB3BP20337 219 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 HSD17B2P37059 387 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 GPR4P46093 362 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 GCGRP47871 477 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 CCR6P51684 374 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 CCR8P51685 355 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 NCBP2P52298 156 aaKnown RBP eCLIP6.8□□□□□ -1.32
USP48-206ENST00000464577 GPNMBQ14956 572 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 MAPK14Q16539 360 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 UAP1L1Q3KQV9 507 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SLC25A35Q3KQZ1 300 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 ZNF805Q5CZA5 627 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 ARSIQ5FYB1 569 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 PIP5KL1Q5T9C9 394 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 NDUFAF5Q5TEU4 345 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 METTL11BQ5VVY1 283 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 ARL9Q6T311 187 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 KIAA1324Q6UXG2 1013 aaKnown RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 ZNF765Q7L2R6 523 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 TRMT11Q7Z4G4 463 aaKnown RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 UBE3DQ7Z6J8 389 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 TRAPPC5Q8IUR0 188 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 DCUN1D3Q8IWE4 304 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SPICQ8N5J4 248 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 BMPERQ8N8U9 685 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 DTX3Q8N9I9 347 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 KISS1RQ969F8 398 aaPredicted RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 DTD2Q96FN9 168 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 C12orf66Q96MD2 445 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 IL17FQ96PD4 163 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 DPYSL5Q9BPU6 564 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 NDC1Q9BTX1 674 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 TMPRSS13Q9BYE2 586 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SHARPINQ9H0F6 387 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 PCBD2Q9H0N5 130 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SLC38A1Q9H2H9 487 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 METTL17Q9H7H0 456 aaPredicted RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 CD93Q9NPY3 652 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SDHAF2Q9NX18 166 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 KLHL28Q9NXS3 571 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SAGE1Q9NXZ1 904 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 NLGN3Q9NZ94 848 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 AKAP7Q9P0M2 348 aaPredicted RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 CHST2Q9Y4C5 530 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 KIAA1549LQ6ZVL6 1849 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 PLXND1Q9Y4D7 1925 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 A0A1B0GTQ1 180 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 A0A1B0GVC2 190 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 A0A1W2PRG6 482 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 A6NIN4 97 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SLC22A31A6NKX4 558 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 ATP6V1G2-DDX39BF2Z307 99 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 TOR1AO14656 332 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 PGRMC2O15173 223 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 STX11O75558 287 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 B3GALNT1O75752 331 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 TPPPO94811 219 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SERPINA3P01011 423 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 WNT1P04628 370 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 HMGN2P05204 90 aaKnown RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 ASGR2P07307 311 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 GIPP09681 153 aaPredicted RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 TYRP14679 529 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 GABRR2P28476 465 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 TRHRP34981 398 aaPredicted RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 NUP62P37198 522 aaPredicted RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 SELENOPP49908 381 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 MAP2K6P52564 334 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 NRG3P56975 720 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 TSPAN5P62079 268 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SNTB2Q13425 540 aaKnown RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 LASP1Q14847 261 aaKnown RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 TCTE1Q5JU00 501 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 C6orf132Q5T0Z8 1188 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 DMKNQ6E0U4 476 aaPredicted RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 PLBD1Q6P4A8 553 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 FAM198BQ6UWH4 519 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 TFAP2EQ6VUC0 442 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 C3P1Q6ZMU1 363 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 CHMP1BQ7LBR1 199 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 GDF7Q7Z4P5 450 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 HMGN2P46Q86SG4 172 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 ADIPOR2Q86V24 386 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 NKAIN4Q8IVV8 208 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 NRMQ8IXM6 262 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 ZBTB44Q8NCP5 570 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 VN1R2Q8NFZ6 395 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 OR2L2Q8NH16 312 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms