RNA–Protein interactions for RNA: ENST00000463741.1

SREBF2-205, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 2

Gene SREBF2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-205	ENST00000463741	GDF2	Q9UK05	429 aa	Predicted RBP	13.43	□□□□□ -0.26
SREBF2-205	ENST00000463741	STK38L	Q9Y2H1	464 aa		13.43	□□□□□ -0.26
SREBF2-205	ENST00000463741	SNX8	Q9Y5X2	465 aa		13.43	□□□□□ -0.26
SREBF2-205	ENST00000463741	C7orf72	A4D263	438 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	PHF1	O43189	567 aa	Predicted RBP	13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	DLX3	O60479	287 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	GPC1	P35052	558 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	VPS26B	Q4G0F5	336 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	SFRP5	Q5T4F7	317 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	ZNF551	Q7Z340	670 aa	Predicted RBP	13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	NUFIP2	Q7Z417	695 aa	Known RBP	13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	LILRA2	Q8N149	483 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	OR4C3	Q8NH37	302 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	OSTF1	Q92882	214 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	KISS1R	Q969F8	398 aa	Predicted RBP	13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	KLHDC3	Q9BQ90	382 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	HDHD5	Q9BXW7	423 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	FUT8	Q9BYC5	575 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	POTEKP	Q9BYX7	375 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	GRPEL1	Q9HAV7	217 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	LRTM1	Q9HBL6	345 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	SIRT5	Q9NXA8	310 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	TMEM216	Q9P0N5	145 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	KLHL13	Q9P2N7	655 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	ZNF180	Q9UJW8	692 aa		13.42	□□□□□ -0.26
SREBF2-205	ENST00000463741	TTC36	A6NLP5	189 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	ADA	P00813	363 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	PABPC4L	P0CB38	370 aa	Known RBP	13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	PRPS2	P11908	318 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	HPGD	P15428	266 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	IMPDH1	P20839	514 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	ATP5F1	P24539	256 aa	Predicted RBP	13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	ADH6	P28332	368 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	SHC1	P29353	583 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	CASQ1	P31415	396 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	PRKAG1	P54619	331 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	FOXA1	P55317	472 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	PKNOX1	P55347	436 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	CARD18	P57730	90 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	FOXF1	Q12946	379 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	PGGHG	Q32M88	737 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	GLE1	Q53GS7	698 aa	Known RBP	13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	CPTP	Q5TA50	214 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	DNM1P46	Q6ZS02	220 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	TUSC5	Q8IXB3	177 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	POC1B	Q8TC44	478 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	HSD17B8	Q92506	261 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	CPNE4	Q96A23	557 aa	Predicted RBP	13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	SRXN1	Q9BYN0	137 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	TRIM2	Q9C040	744 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	BARX1	Q9HBU1	254 aa	Predicted RBP	13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	HHATL	Q9HCP6	504 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	MID1IP1	Q9NPA3	183 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	TAS2R7	Q9NYW3	318 aa		13.41	□□□□□ -0.26
SREBF2-205	ENST00000463741	SCD	O00767	359 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	PDPK1	O15530	556 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	SSX4	O60224	188 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	GPRIN2	O60269	458 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	NKX2-2	O95096	273 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	FES	P07332	822 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	NGFR	P08138	427 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	SNRPA	P09012	282 aa	Known RBP	13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	RNPS1	Q15287	305 aa	Known RBP	13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	STK11	Q15831	433 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	C6orf52	Q5T4I8	152 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	ANKRD26P1	Q6NSI1	321 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	SEZ6L2	Q6UXD5	910 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	IKBIP	Q70UQ0	350 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	ZAR1	Q86SH2	424 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	TRABD2A	Q86V40	505 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	RELL1	Q8IUW5	271 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	SLC22A9	Q8IVM8	553 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	ACTRT2	Q8TDY3	377 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	L3HYPDH	Q96EM0	354 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	OTUB1	Q96FW1	271 aa	Predicted RBP	13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	FAIM	Q9NVQ4	179 aa		13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	CISD1	Q9NZ45	108 aa	Known RBP	13.4	□□□□□ -0.26
SREBF2-205	ENST00000463741	IGHV4-30-2	A0A087WSY4	118 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	DPRX	A6NFQ7	191 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	RAMP1	O60894	148 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	KCNK2	O95069	426 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	NUDT14	O95848	222 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	THBS1	P07996	1170 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	FAM157C	P0CG43	387 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	ACP2	P11117	423 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	PTN	P21246	168 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	PRIM2	P49643	509 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	NUDT6	P53370	316 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	PRKAA2	P54646	552 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	CDH11	P55287	796 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	C21orf58	P58505	322 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	CD226	Q15762	336 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	NOXRED1	Q6NXP6	359 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	FCRLA	Q7L513	359 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	MISP	Q8IVT2	679 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	CCNYL1	Q8N7R7	359 aa		13.39	□□□□□ -0.27
SREBF2-205	ENST00000463741	CDRT4	Q8N9R6	151 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms