RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 HMGB1P1B2RPK0 211 aaPredicted RBP17.72■□□□□ 0.43
VARS-221ENST00000463184 UBFD1O14562 309 aaKnown RBP17.72■□□□□ 0.43
VARS-221ENST00000463184 EIF1AYO14602 144 aaKnown RBP17.72■□□□□ 0.43
VARS-221ENST00000463184 SS18L1O75177 396 aaPredicted RBP17.72■□□□□ 0.43
VARS-221ENST00000463184 KCNH1O95259 989 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 IFI6P09912 130 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 ZNF17P17021 662 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 SERPINB5P36952 375 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 SLC6A8P48029 635 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.72■□□□□ 0.43
VARS-221ENST00000463184 PPP4R4Q6NUP7 873 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 BEND4Q6ZU67 534 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 WDR75Q8IWA0 830 aaKnown RBP17.72■□□□□ 0.43
VARS-221ENST00000463184 FAM76AQ8TAV0 307 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 AMDHD1Q96NU7 426 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 KCNA7Q96RP8 456 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 OR10A4Q9H209 315 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 MYNNQ9NPC7 610 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 ZANQ9Y493 2812 aa17.72■□□□□ 0.43
VARS-221ENST00000463184 A0A087WZY1 265 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 WDR91A4D1P6 747 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 GABRA3P34903 492 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 APOOLQ6UXV4 268 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 ZCCHC23Q6ZST2 131 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 ZNF611Q8N823 705 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 OR6Y1Q8NGX8 325 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 OR10D3Q8NH80 312 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 SPATA3Q8NHX4 192 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 PLPPR2Q96GM1 343 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 PAIP2Q9BPZ3 127 aaKnown RBP17.71■□□□□ 0.43
VARS-221ENST00000463184 EML4Q9HC35 981 aaKnown RBP17.71■□□□□ 0.43
VARS-221ENST00000463184 VDAC3Q9Y277 283 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 GPR52Q9Y2T5 361 aa17.71■□□□□ 0.43
VARS-221ENST00000463184 SHISA8B8ZZ34 492 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 HS3ST1O14792 307 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 GMFGO60234 142 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 ATP5J2P56134 94 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 WDR4P57081 412 aaKnown RBP17.7■□□□□ 0.42
VARS-221ENST00000463184 IMPG1Q17R60 797 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 GRAMD1BQ3KR37 738 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 IKBIPQ70UQ0 350 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 STK32CQ86UX6 486 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 HOMEZQ8IX15 550 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 GTPBP8Q8N3Z3 284 aaPredicted RBP17.7■□□□□ 0.42
VARS-221ENST00000463184 ADGRG7Q96K78 797 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 TMEM204Q9BSN7 226 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 CLEC4AQ9UMR7 237 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 USF3Q68DE3 2245 aa17.7■□□□□ 0.42
VARS-221ENST00000463184 GXYLT2A0PJZ3 443 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 ALG1L2C9J202 215 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 ADAMDEC1O15204 470 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 ATP8B1O43520 1251 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 NDUFB5O43674 189 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 CRCPO75575 148 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 SYNGR4O95473 234 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 PLAUP00749 431 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 IGKV1D-16P01601 117 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 SERPINE1P05121 402 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 PRPS2P11908 318 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 NEFHP12036 1026 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 FOXA1P55317 472 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 RAC1P63000 192 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 CHI3L2Q15782 390 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 CTU2Q2VPK5 515 aaKnown RBP17.69■□□□□ 0.42
VARS-221ENST00000463184 VPS26BQ4G0F5 336 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 ARL13AQ5H913 290 aaPredicted RBP17.69■□□□□ 0.42
VARS-221ENST00000463184 GTF2IRD2BQ6EKJ0 949 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 ESPNLQ6ZVH7 1005 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 CXXC5Q7LFL8 322 aaKnown RBP17.69■□□□□ 0.42
VARS-221ENST00000463184 TRIM46Q7Z4K8 759 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 GTF2IRD2Q86UP8 949 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 MGARPQ8TDB4 240 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 GPR151Q8TDV0 419 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 PIK3R3Q92569 461 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 ZBTB8AQ96BR9 441 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 ACTR6Q9GZN1 396 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 ADAM21Q9UKJ8 722 aa17.69■□□□□ 0.42
VARS-221ENST00000463184 POLR3HQ9Y535 204 aaPredicted RBP17.69■□□□□ 0.42
VARS-221ENST00000463184 C7orf72A4D263 438 aa17.68■□□□□ 0.42
VARS-221ENST00000463184 RSL1D1O76021 490 aaKnown RBP17.68■□□□□ 0.42
VARS-221ENST00000463184 NGFRP08138 427 aa17.68■□□□□ 0.42
VARS-221ENST00000463184 UROSP10746 265 aa17.68■□□□□ 0.42
VARS-221ENST00000463184 PSMB1P20618 241 aaKnown RBP17.68■□□□□ 0.42
VARS-221ENST00000463184 CAPRIN1Q14444 709 aaKnown RBP17.68■□□□□ 0.42
VARS-221ENST00000463184 PDSS1Q5T2R2 415 aa17.68■□□□□ 0.42
VARS-221ENST00000463184 CPTPQ5TA50 214 aa17.68■□□□□ 0.42
VARS-221ENST00000463184 WFDC8Q8IUA0 241 aa17.68■□□□□ 0.42
VARS-221ENST00000463184 ACTRT2Q8TDY3 377 aa17.68■□□□□ 0.42
VARS-221ENST00000463184 HOXB13Q92826 284 aaPredicted RBP17.68■□□□□ 0.42
VARS-221ENST00000463184 FBN3Q75N90 2809 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 TMEM114B3SHH9 223 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 AZIN1O14977 448 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 CXCL13O43927 109 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 CRLF1O75462 422 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 SOX30O94993 753 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 NKX2-2O95096 273 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 CHRNGP07510 517 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 FGF4P08620 206 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 BGNP21810 368 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 MAP3K8P41279 467 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms