RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ITPR3Q14573 2671 aa8.24□□□□□ -1.09
BRCA1-207ENST00000461798 PRRC2AP48634 2157 aaKnown RBP8.24□□□□□ -1.09
BRCA1-207ENST00000461798 MED13LQ71F56 2210 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 SH3D21A4FU49 640 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 BIRC5O15392 142 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 CTIFO43310 598 aaKnown RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 SNUPNO95149 360 aaKnown RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 ATE1O95260 518 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 CD79BP40259 229 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 CPA2P48052 419 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 CCT3P49368 545 aaKnown RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 CLDN8P56748 225 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 RAC1P63000 192 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 POU6F2P78424 691 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 FAM27E3Q08E93 113 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 MAD2L1Q13257 205 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 PTGR1Q14914 329 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 LSM12Q3MHD2 195 aaKnown RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 KLHL26Q53HC5 615 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 CDC73Q6P1J9 531 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 VWA1Q6PCB0 445 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 FIGNL1Q6PIW4 674 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 PAMR1Q6UXH9 720 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 FAM214BQ7L5A3 538 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 MTERF4Q7Z6M4 381 aaKnown RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 ZAR1Q86SH2 424 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 TGIF2LYQ8IUE0 185 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 NUDCD3Q8IVD9 361 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 WDR75Q8IWA0 830 aaKnown RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 COX18Q8N8Q8 333 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 CHDHQ8NE62 594 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 OR7A2PQ8NGA2 310 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 OR56A1Q8NGH5 318 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 FNDC9Q8TBE3 224 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 ZBTB8AQ96BR9 441 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 MOAP1Q96BY2 351 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 PGM2Q96G03 612 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 ZNF845Q96IR2 970 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 SLC39A3Q9BRY0 314 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 YIPF4Q9BSR8 244 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 PINK1Q9BXM7 581 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 ACTRT3Q9BYD9 372 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 BHLHE41Q9C0J9 482 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 HOXD1Q9GZZ0 328 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 CXorf36Q9H7Y0 433 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 ZCCHC3Q9NUD5 404 aaKnown RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 GPATCH2Q9NW75 528 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 GIMAP2Q9UG22 337 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 PLEKHA6Q9Y2H5 1048 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-207ENST00000461798 TESMINQ9Y4I5 508 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 C2CD3Q4AC94 2353 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 CELSR1Q9NYQ6 3014 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 MED12LQ86YW9 2145 aa8.23□□□□□ -1.09
BRCA1-207ENST00000461798 SETD2Q9BYW2 2564 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-207ENST00000461798 A0A1W2PPR1 153 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 NPIPB9F8W1W9 429 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 H3BML4 177 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 SCDO00767 359 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 CASKO14936 926 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 SEC14L5O43304 696 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 AQP8O94778 261 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 RAF1P04049 648 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 KRT16P08779 473 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 LINGO3P0C6S8 592 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 DHRS4L1P0CG22 281 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 FCGR2AP12318 317 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 CD99P14209 185 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 EFNA1P20827 205 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-207ENST00000461798 ADH6P28332 368 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 EIF1P41567 113 aaKnown RBP8.22□□□□□ -1.09
BRCA1-207ENST00000461798 LASP1Q14847 261 aaKnown RBP8.22□□□□□ -1.09
BRCA1-207ENST00000461798 PON3Q15166 354 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 SGCBQ16585 318 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 CTU2Q2VPK5 515 aaKnown RBP8.22□□□□□ -1.09
BRCA1-207ENST00000461798 PLPPR5Q32ZL2 321 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 TNFAIP8L3Q5GJ75 292 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 AP1ARQ63HQ0 302 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 ESPNLQ6ZVH7 1005 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 KRTCAP2Q8N6L1 136 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 CNEP1R1Q8N9A8 125 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 ZNF610Q8N9Z0 462 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 FNDC5Q8NAU1 212 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 POC1BQ8TC44 478 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 AGR3Q8TD06 166 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 SFXN5Q8TD22 340 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 ADAMTS15Q8TE58 950 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 NUDT8Q8WV74 236 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 TUBGCP3Q96CW5 907 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 WFIKKN1Q96NZ8 548 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 NEUROD4Q9HD90 331 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 PLSCR4Q9NRQ2 329 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 GLRX2Q9NS18 164 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 MED17Q9NVC6 651 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 HAO1Q9UJM8 370 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 EIF3LQ9Y262 564 aaKnown RBP8.22□□□□□ -1.09
BRCA1-207ENST00000461798 VDAC3Q9Y277 283 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 ACTL7BQ9Y614 415 aa8.22□□□□□ -1.09
BRCA1-207ENST00000461798 SHISA8B8ZZ34 492 aa8.21□□□□□ -1.1
BRCA1-207ENST00000461798 C16orf97H3BN30 126 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms