RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 HCRTR2O43614 444 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 ZIC3O60481 467 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 AK1P00568 194 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 PGRP06401 933 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 UQCRC1P31930 480 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 KHKP50053 298 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 LHX2P50458 406 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 ASCL1P50553 236 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 RNF144AP50876 292 aaPredicted RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 ZNF41P51814 821 aaPredicted RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 ZNF136P52737 540 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 KRTAP10-9P60411 292 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 PDCD4Q53EL6 469 aaKnown RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 ATAD3BQ5T9A4 648 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 TNFAIP8L2Q6P589 184 aaPredicted RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 MEIOBQ8N635 442 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 TRIML2Q8N7C3 387 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 GLB1L3Q8NCI6 653 aaPredicted RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 OR5M1Q8NGP8 315 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 MBD3L2Q8NHZ7 208 aaPredicted RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 PHOSPHO1Q8TCT1 267 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 MAELQ96JY0 434 aaKnown RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 CCDC115Q96NT0 180 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 OR52B2Q96RD2 323 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 TUBA1CQ9BQE3 449 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 SLC35A5Q9BS91 424 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 HOXD1Q9GZZ0 328 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 OR51I1Q9H343 314 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 SLCO1B3Q9NPD5 702 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 EXD2Q9NVH0 621 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 ZNF629Q9UEG4 869 aaPredicted RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 KCNN3Q9UGI6 736 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 BTNL2Q9UIR0 455 aa13.92□□□□□ -0.18
VARS-219ENST00000461328 INTS1Q8N201 2190 aaKnown RBP13.92□□□□□ -0.18
VARS-219ENST00000461328 IGLV3-32A0A0A0MS00 114 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 CLCA1A8K7I4 914 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 SCN2BO60939 215 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 SLC22A3O75751 556 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 NUDT14O95848 222 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 PEPDP12955 493 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 CAPN3P20807 821 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 CTSSP25774 331 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 IL12AP29459 219 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 DLX5P56178 289 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 STX1BP61266 288 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 PHC1P78364 1004 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 HPCAP84074 193 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 LRRC74AQ0VAA2 488 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 GSTA3Q16772 222 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 ARSKQ6UWY0 536 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 DNAJC14Q6Y2X3 702 aaPredicted RBP13.91□□□□□ -0.18
VARS-219ENST00000461328 P4HA3Q7Z4N8 544 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 GRAMD2AQ8IUY3 354 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 TMCO5AQ8N6Q1 288 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 C9orf106Q8NAJ2 232 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 B4GALNT2Q8NHY0 566 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 SERHL2Q9H4I8 314 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 L3MBTL1Q9Y468 752 aa13.91□□□□□ -0.18
VARS-219ENST00000461328 A0A087WZY1 265 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 A0A1W2PQD3 144 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 OR2M5A3KFT3 312 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 CCDC154A6NI56 674 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 SHISA8B8ZZ34 492 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 LINC01387J3KSC0 135 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 GTPBP1O00178 669 aaKnown RBP13.9□□□□□ -0.18
VARS-219ENST00000461328 STX11O75558 287 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 SASH3O75995 380 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 AGR2O95994 175 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 TMIGD3P0DMS9 266 aaPredicted RBP13.9□□□□□ -0.18
VARS-219ENST00000461328 OR12D1P0DN82 309 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 ZNF708P17019 499 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 OPRM1P35372 400 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 AGFG1P52594 562 aaKnown RBP13.9□□□□□ -0.18
VARS-219ENST00000461328 ATP12AP54707 1039 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 CLDN18P56856 261 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 B3GALT5-AS1P59052 145 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 SNTB1Q13884 538 aaKnown RBP13.9□□□□□ -0.18
VARS-219ENST00000461328 GPR68Q15743 365 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 CD226Q15762 336 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 ZNF621Q6ZSS3 439 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 TMEM200AQ86VY9 491 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 MIER2Q8N344 545 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 GOT1L1Q8NHS2 421 aaPredicted RBP13.9□□□□□ -0.18
VARS-219ENST00000461328 XAGE5Q8WWM1 108 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 RNASE6Q93091 150 aaKnown RBP13.9□□□□□ -0.18
VARS-219ENST00000461328 NEURL3Q96EH8 262 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 TM9SF2Q99805 663 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 TCF7L2Q9NQB0 619 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 ZIM2Q9NZV7 527 aa13.9□□□□□ -0.18
VARS-219ENST00000461328 EEF1E1-BLOC1S5C9J1V9 151 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 SYT5O00445 386 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 RFXANKO14593 260 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 ZNF195O14628 629 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 EEF1E1O43324 174 aaKnown RBP13.89□□□□□ -0.19
VARS-219ENST00000461328 TNFRSF21O75509 655 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 ANP32DO95626 131 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 IL6P05231 212 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 ZNF17P17021 662 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 PEX19P40855 299 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 KIR2DL3P43628 341 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms