RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 NPIPA5A0A0B4J1W7 369 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 CLCA1A8K7I4 914 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 NPIPA7E9PJI5 369 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 DIAPH2O60879 1101 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 NPIPA8P0DM63 369 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 IGFBP2P18065 325 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 BMP5P22003 454 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 ATP12AP54707 1039 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 LRRC74AQ0VAA2 488 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 KLHL26Q53HC5 615 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 ARSKQ6UWY0 536 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 GDF7Q7Z4P5 450 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 MTERF4Q7Z6M4 381 aaKnown RBP20.33■□□□□ 0.85
TRAF4-207ENST00000461195 C9orf106Q8NAJ2 232 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 CHDHQ8NE62 594 aaPredicted RBP20.33■□□□□ 0.85
TRAF4-207ENST00000461195 OR5M1Q8NGP8 315 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 SH3YL1Q96HL8 342 aaPredicted RBP20.33■□□□□ 0.85
TRAF4-207ENST00000461195 MARK4Q96L34 752 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 SDF2Q99470 211 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 TM9SF2Q99805 663 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 TREX2Q9BQ50 279 aaPredicted RBP20.33■□□□□ 0.85
TRAF4-207ENST00000461195 TRIM8Q9BZR9 551 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 OR51I1Q9H343 314 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 EXD2Q9NVH0 621 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 VDAC3Q9Y277 283 aa20.33■□□□□ 0.85
TRAF4-207ENST00000461195 INTS1Q8N201 2190 aaKnown RBP20.32■□□□□ 0.84
TRAF4-207ENST00000461195 APCP25054 2843 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 H3BNH8 94 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 UBDO15205 165 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 SLC22A3O75751 556 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 AGR2O95994 175 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 CTSSP25774 331 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 CHI3L1P36222 383 aaPredicted RBP20.32■□□□□ 0.84
TRAF4-207ENST00000461195 ZNF136P52737 540 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 PPP2R2AP63151 447 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 CD226Q15762 336 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 TMEM44Q2T9K0 475 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 ARHGAP11BQ3KRB8 267 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 SAXO2Q658L1 398 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 EPGNQ6UW88 154 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 CHMP1BQ7LBR1 199 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 UBQLNLQ8IYU4 475 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 MEIOBQ8N635 442 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 TRIML2Q8N7C3 387 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 B4GALNT2Q8NHY0 566 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 PHOSPHO1Q8TCT1 267 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 WNT2BQ93097 391 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 NEURL3Q96EH8 262 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 PANX1Q96RD7 426 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 SLC35A5Q9BS91 424 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 SLCO1B3Q9NPD5 702 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 INTS9Q9NV88 658 aaKnown RBP20.32■□□□□ 0.84
TRAF4-207ENST00000461195 ZIM2Q9NZV7 527 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 CLCF1Q9UBD9 225 aa20.32■□□□□ 0.84
TRAF4-207ENST00000461195 NPIPB9F8W1W9 429 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 H3BML4 177 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 HCRTR2O43614 444 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 STX11O75558 287 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 TGDSO95455 350 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 IL6P05231 212 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 ZNF17P17021 662 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 ZNF41P51814 821 aaPredicted RBP20.31■□□□□ 0.84
TRAF4-207ENST00000461195 CASP9P55211 416 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 EEFSECP57772 596 aaKnown RBP20.31■□□□□ 0.84
TRAF4-207ENST00000461195 ATAD3BQ5T9A4 648 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 C16orf62Q7Z3J2 963 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 RELL2Q8NC24 303 aaPredicted RBP20.31■□□□□ 0.84
TRAF4-207ENST00000461195 ZFP3Q96NJ6 502 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 SDR39U1Q9NRG7 319 aaPredicted RBP20.31■□□□□ 0.84
TRAF4-207ENST00000461195 DTNAQ9Y4J8 743 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 AP4B1Q9Y6B7 739 aa20.31■□□□□ 0.84
TRAF4-207ENST00000461195 CCDC154A6NI56 674 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 SHISA8B8ZZ34 492 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 RCBTB2O95199 551 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 TMIGD3P0DMS9 266 aaPredicted RBP20.3■□□□□ 0.84
TRAF4-207ENST00000461195 OR12D1P0DN82 309 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 KHKP50053 298 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.3■□□□□ 0.841e-8■■■□□ 18
TRAF4-207ENST00000461195 HEPHL1Q6MZM0 1159 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 TNFAIP8L2Q6P589 184 aaPredicted RBP20.3■□□□□ 0.84
TRAF4-207ENST00000461195 POMZP3Q6PJE2 187 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 GRAMD2AQ8IUY3 354 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 DMRTC2Q8IXT2 367 aaPredicted RBP20.3■□□□□ 0.84
TRAF4-207ENST00000461195 ZNF295-AS1Q8N0V1 137 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 ZNF614Q8N883 585 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 XAGE5Q8WWM1 108 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 ZBTB8AQ96BR9 441 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 INPP5KQ9BT40 448 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 NMUR2Q9GZQ4 415 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 MED17Q9NVC6 651 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 STOML1Q9UBI4 398 aa20.3■□□□□ 0.84
TRAF4-207ENST00000461195 C7orf72A4D263 438 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 GTPBP1O00178 669 aaKnown RBP20.29■□□□□ 0.84
TRAF4-207ENST00000461195 SEC14L5O43304 696 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 SASH3O75995 380 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 IL18BPO95998 194 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 OPRM1P35372 400 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 ASCL1P50553 236 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 CLDN15P56746 228 aa20.29■□□□□ 0.84
TRAF4-207ENST00000461195 ZNF117Q03924 483 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms