RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 RNF220Q5VTB9 566 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 GLYATQ6IB77 296 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 FAM180AQ6UWF9 173 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 TREML4Q6UXN2 200 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 GALNTL5Q7Z4T8 443 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 DHFR2Q86XF0 187 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 PTRH1Q86Y79 214 aaKnown RBP10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 PLCZ1Q86YW0 608 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 OR52E4Q8NGH9 312 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 OR4C3Q8NH37 302 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 FIG4Q92562 907 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 ASB9Q96DX5 294 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 NSMCE2Q96MF7 247 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 SIGLEC12Q96PQ1 595 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 PINK1Q9BXM7 581 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 PIF1Q9H611 641 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 SH2D2AQ9NP31 389 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 ZNF71Q9NQZ8 489 aaPredicted RBP10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 KLHL1Q9NR64 748 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 SELENONQ9NZV5 590 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 ACTR3BQ9P1U1 418 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 CNOT11Q9UKZ1 510 aaKnown RBP10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 GPC6Q9Y625 555 aaPredicted RBP10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 KCNE3Q9Y6H6 103 aa10.09□□□□□ -0.79
SMNDC1-203ENST00000460483 APC2O95996 2303 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 AKAP13Q12802 2813 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 ASPMQ8IZT6 3477 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 NPIPB9F8W1W9 429 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 SCO2O43819 266 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 MAN1A2O60476 641 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 NUDT14O95848 222 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 IGKV1D-16P01601 117 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 CCL3P10147 92 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 ITGA2P17301 1181 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 GGT1P19440 569 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 TCN1P20061 433 aaPredicted RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 PGCP20142 388 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 AQP1P29972 269 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 EIF1P41567 113 aaKnown RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 GZMMP51124 257 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 P2RX1P51575 399 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 ZNF41P51814 821 aaPredicted RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 MAP2K6P52564 334 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 DSCR4P56555 118 aaPredicted RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 PCBP3P57721 371 aaKnown RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 SELPLGQ14242 412 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 FGFBP1Q14512 234 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 LRRC23Q53EV4 343 aaPredicted RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 PDZK1Q5T2W1 519 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 ZNF468Q5VIY5 522 aaPredicted RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 PRAMEF20Q5VT98 475 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 TIGD3Q6B0B8 471 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 DHRS4L2Q6PKH6 230 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 FKBP9P1Q75LS8 142 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 MDGA2Q7Z553 956 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 RANBP3LQ86VV4 465 aaPredicted RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 PTOV1Q86YD1 416 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 GRAMD2AQ8IUY3 354 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 SULF2Q8IWU5 870 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 TMCO5AQ8N6Q1 288 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 ZFP62Q8NB50 900 aaPredicted RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 OR2M7Q8NG81 312 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 B4GALNT2Q8NHY0 566 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 GRHL3Q8TE85 626 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 DUSP19Q8WTR2 217 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 NR4A3Q92570 626 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 JSRP1Q96MG2 331 aaPredicted RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 FRMD6Q96NE9 622 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 NODALQ96S42 347 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 UGT2B28Q9BY64 529 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 LAT2Q9GZY6 243 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 YY1AP1Q9H869 796 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 CD300AQ9UGN4 299 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 ZNF443Q9Y2A4 671 aaPredicted RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 MRPS18CQ9Y3D5 142 aaKnown RBP10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 FER1L5A0AVI2 2057 aa10.08□□□□□ -0.8
SMNDC1-203ENST00000460483 ACACAQ13085 2346 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 IGLV3-32A0A0A0MS00 114 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 CFAP73A6NFT4 308 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 ATXN7O15265 892 aaPredicted RBP10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 RRP9O43818 475 aaKnown RBP10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 ZNF354AO60765 605 aaPredicted RBP10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 TRIM3O75382 744 aaPredicted RBP10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 MFN2O95140 757 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 F10P00742 488 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 LINGO3P0C6S8 592 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 ZNF24P17028 368 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 RPS4Y1P22090 263 aaKnown RBP10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 HTR3AP46098 478 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 MEOX1P50221 254 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 SELENOWP63302 87 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 FUT5Q11128 374 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 SLC10A1Q14973 349 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 TOMM20Q15388 145 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 SF3B4Q15427 424 aaKnown RBP eCLIP10.07□□□□□ -0.86e-7■■■■□ 20.9
SMNDC1-203ENST00000460483 FXNQ16595 210 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 HYAL4Q2M3T9 481 aa10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 GLYR1Q49A26 553 aaPredicted RBP10.07□□□□□ -0.8
SMNDC1-203ENST00000460483 KRTCAP3Q53RY4 240 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms