RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 NME5P56597 212 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 UFM1P61960 85 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 PHC1P78364 1004 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 TMEM44Q2T9K0 475 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 FAM174BQ3ZCQ3 159 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 FBXL19-AS1Q494R0 122 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 NXNQ6DKJ4 435 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 ANKRD46Q86W74 232 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 OR5D16Q8NGK9 328 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 B4GALNT2Q8NHY0 566 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 RNASE6Q93091 150 aaKnown RBP20.76■□□□□ 0.91
PTPN4-208ENST00000460289 ZBTB8AQ96BR9 441 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 SLC35G5Q96KT7 338 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 ATP6V1G3Q96LB4 118 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 LURAP1Q96LR2 239 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 ZBTB18Q99592 522 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 SFXN3Q9BWM7 321 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 MCCC2Q9HCC0 563 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 ARGLU1Q9NWB6 273 aaPredicted RBP20.76■□□□□ 0.91
PTPN4-208ENST00000460289 BTNL2Q9UIR0 455 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 VDAC3Q9Y277 283 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 LRBAP50851 2863 aa20.76■□□□□ 0.91
PTPN4-208ENST00000460289 TNFRSF21O75509 655 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 AGR2O95994 175 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 AGFG1P52594 562 aaKnown RBP20.75■□□□□ 0.91
PTPN4-208ENST00000460289 DLX5P56178 289 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 RPS3AP61247 264 aaKnown RBP20.75■□□□□ 0.91
PTPN4-208ENST00000460289 RPS26P62854 115 aaKnown RBP20.75■□□□□ 0.91
PTPN4-208ENST00000460289 LRRC74AQ0VAA2 488 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 KLHL26Q53HC5 615 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 P4HA3Q7Z4N8 544 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 CLEC4FQ8N1N0 589 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 GLB1L3Q8NCI6 653 aaPredicted RBP20.75■□□□□ 0.91
PTPN4-208ENST00000460289 CHDHQ8NE62 594 aaPredicted RBP20.75■□□□□ 0.91
PTPN4-208ENST00000460289 PHOSPHO1Q8TCT1 267 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 MIPOL1Q8TD10 442 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 INTS12Q96CB8 462 aaKnown RBP20.75■□□□□ 0.91
PTPN4-208ENST00000460289 SH3YL1Q96HL8 342 aaPredicted RBP20.75■□□□□ 0.91
PTPN4-208ENST00000460289 MAELQ96JY0 434 aaKnown RBP20.75■□□□□ 0.91
PTPN4-208ENST00000460289 SDF2Q99470 211 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 SH3GL2Q99962 352 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 ZNF559Q9BR84 538 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 EXD2Q9NVH0 621 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 GPR45Q9Y5Y3 372 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 DCHS2Q6V1P9 2916 aa20.75■□□□□ 0.91
PTPN4-208ENST00000460289 CREBBPQ92793 2442 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 SLC22A20A6NK97 555 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 IDO1P14902 403 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 CAPN3P20807 821 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 SUCLG1P53597 346 aaKnown RBP20.74■□□□□ 0.91
PTPN4-208ENST00000460289 MYBPHQ13203 477 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 CD226Q15762 336 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 OR2A2Q6IF42 318 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 HDXQ7Z353 690 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 GTPBP8Q8N3Z3 284 aaPredicted RBP20.74■□□□□ 0.91
PTPN4-208ENST00000460289 TRIML2Q8N7C3 387 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 GOLGA6L1Q8N7Z2 621 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 TEX37Q96LM6 180 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 CCDC115Q96NT0 180 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 MED17Q9NVC6 651 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 L3MBTL1Q9Y468 752 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 DTNAQ9Y4J8 743 aa20.74■□□□□ 0.91
PTPN4-208ENST00000460289 C7orf72A4D263 438 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 GTPBP1O00178 669 aaKnown RBP20.73■□□□□ 0.91
PTPN4-208ENST00000460289 SEC14L5O43304 696 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 STX11O75558 287 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 PGRP06401 933 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 CRHP06850 196 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 CLDN15P56746 228 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 FOXF2Q12947 444 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 ARHGAP11BQ3KRB8 267 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 ATAD3BQ5T9A4 648 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 C16orf62Q7Z3J2 963 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 OR52E6Q96RD3 313 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 NMUR2Q9GZQ4 415 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 OR51I1Q9H343 314 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 SERHL2Q9H4I8 314 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 JKAMPQ9P055 326 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 PCNX3Q9H6A9 2034 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 FBN2P35556 2912 aa20.73■□□□□ 0.91
PTPN4-208ENST00000460289 NPIPA5A0A0B4J1W7 369 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 SHISA8B8ZZ34 492 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 EEF1E1-BLOC1S5C9J1V9 151 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 NPIPA7E9PJI5 369 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 NPIPB9F8W1W9 429 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 EEF1E1O43324 174 aaKnown RBP20.72■□□□□ 0.91
PTPN4-208ENST00000460289 TGM6O95932 706 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 NPIPA8P0DM63 369 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 CHI3L1P36222 383 aaPredicted RBP20.72■□□□□ 0.91
PTPN4-208ENST00000460289 EIF1P41567 113 aaKnown RBP20.72■□□□□ 0.91
PTPN4-208ENST00000460289 KIR2DL3P43628 341 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 P2RX1P51575 399 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 CLDN20P56880 219 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 ZNF117Q03924 483 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 GSTA3Q16772 222 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 PLPPR5Q32ZL2 321 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 SLC9B1Q4ZJI4 515 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 SAXO2Q658L1 398 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 PLXDC2Q6UX71 529 aa20.72■□□□□ 0.91
PTPN4-208ENST00000460289 KIF18BQ86Y91 864 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms