RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ATP6V1C1P21283 382 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 SOAT1P35610 550 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 EEF1A1P68104 462 aaKnown RBP17.04■□□□□ 0.32
COL5A1-203ENST00000460264 BST1Q10588 318 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 TESK1Q15569 626 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 PLPPR5Q32ZL2 321 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 DCST2Q5T1A1 773 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 EEF1A1P5Q5VTE0 462 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 OR4F3Q6IEY1 312 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 OR2A2Q6IF42 318 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 GGNQ86UU5 652 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 MISPQ8IVT2 679 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 CLECL1Q8IZS7 167 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 GTPBP8Q8N3Z3 284 aaPredicted RBP17.04■□□□□ 0.32
COL5A1-203ENST00000460264 METTL25Q8N6Q8 603 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 ANKRD42Q8N9B4 389 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 ACTRT2Q8TDY3 377 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 ADAMTS15Q8TE58 950 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 NRGNQ92686 78 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 SH3YL1Q96HL8 342 aaPredicted RBP17.04■□□□□ 0.32
COL5A1-203ENST00000460264 NPAS1Q99742 590 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 PAIP2Q9BPZ3 127 aaKnown RBP17.04■□□□□ 0.32
COL5A1-203ENST00000460264 KLHDC3Q9BQ90 382 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 NUF2Q9BZD4 464 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 RASSF1Q9NS23 344 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 PACSIN3Q9UKS6 424 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 ZNF175Q9Y473 711 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 KCNE3Q9Y6H6 103 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 RNASET2O00584 256 aaKnown RBP17.03■□□□□ 0.32
COL5A1-203ENST00000460264 SOX30O94993 753 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 CPA2P48052 419 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 ZNF41P51814 821 aaPredicted RBP17.03■□□□□ 0.32
COL5A1-203ENST00000460264 WDR4P57081 412 aaKnown RBP17.03■□□□□ 0.32
COL5A1-203ENST00000460264 RPS26P62854 115 aaKnown RBP17.03■□□□□ 0.32
COL5A1-203ENST00000460264 OCRLQ01968 901 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 HHATQ5VTY9 493 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 BHLHB9Q6PI77 547 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 LRRC34Q8IZ02 419 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 OR8J2Q8NGG1 315 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 FNDC9Q8TBE3 224 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 ZBTB8AQ96BR9 441 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 ZNF845Q96IR2 970 aaPredicted RBP17.03■□□□□ 0.32
COL5A1-203ENST00000460264 OR7D2Q96RA2 312 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 POLDIP3Q9BY77 421 aaKnown RBP17.03■□□□□ 0.32
COL5A1-203ENST00000460264 SERHL2Q9H4I8 314 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 RNF122Q9H9V4 155 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 MEAF6Q9HAF1 191 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 MED17Q9NVC6 651 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 PNPOQ9NVS9 261 aa17.03■□□□□ 0.32
COL5A1-203ENST00000460264 NPIPA5A0A0B4J1W7 369 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 TMEM120BA0PK00 339 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 NPIPA7E9PJI5 369 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 ANKRD28O15084 1053 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 NPIPA8P0DM63 369 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 PSMA4P25789 261 aaKnown RBP17.02■□□□□ 0.32
COL5A1-203ENST00000460264 RPS3AP61247 264 aaKnown RBP17.02■□□□□ 0.32
COL5A1-203ENST00000460264 ZNF117Q03924 483 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 DAZAP2Q15038 168 aaPredicted RBP17.02■□□□□ 0.32
COL5A1-203ENST00000460264 PON3Q15166 354 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 KLHL26Q53HC5 615 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.02■□□□□ 0.32
COL5A1-203ENST00000460264 VWA1Q6PCB0 445 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 CNEP1R1Q8N9A8 125 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 ZNF527Q8NB42 609 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 OR5D16Q8NGK9 328 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 B4GALNT2Q8NHY0 566 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 LINC01560Q8TB33 94 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 TESCQ96BS2 214 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 DPY30Q9C005 99 aa17.02■□□□□ 0.32
COL5A1-203ENST00000460264 CLEC4MQ9H2X3 399 aaPredicted RBP17.02■□□□□ 0.32
COL5A1-203ENST00000460264 ABCA4P78363 2273 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 RNF103-CHMP3A0A140T963 221 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 A8MXE2 369 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 NPIPB9F8W1W9 429 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 MSTNO14793 375 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 EPXP11678 715 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 LBPP18428 481 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 DNAJA1P31689 397 aaKnown RBP17.01■□□□□ 0.31
COL5A1-203ENST00000460264 CPOXP36551 454 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 OGFOD2Q6N063 350 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 MTERF4Q7Z6M4 381 aaKnown RBP17.01■□□□□ 0.31
COL5A1-203ENST00000460264 CLEC4FQ8N1N0 589 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 PHOSPHO1Q8TCT1 267 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 STARD4Q96DR4 205 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 RNF145Q96MT1 663 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 HOXD1Q9GZZ0 328 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 STOML1Q9UBI4 398 aa17.01■□□□□ 0.31
COL5A1-203ENST00000460264 EIF1AYO14602 144 aaKnown RBP17■□□□□ 0.31
COL5A1-203ENST00000460264 OIP5O43482 229 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 SCN2BO60939 215 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 SMNDC1O75940 238 aaKnown RBP eCLIP17■□□□□ 0.31
COL5A1-203ENST00000460264 LINGO3P0C6S8 592 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 FCGR2AP12318 317 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 KIR2DL2P43627 348 aaPredicted RBP17■□□□□ 0.31
COL5A1-203ENST00000460264 RNF144AP50876 292 aaPredicted RBP17■□□□□ 0.31
COL5A1-203ENST00000460264 ATP12AP54707 1039 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 SIRPAP78324 504 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 PHC1P78364 1004 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 GUSBP1Q15486 140 aa17■□□□□ 0.31
COL5A1-203ENST00000460264 SGCBQ16585 318 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms