RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CER1O95813 267 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 IGHV2-70P01814 119 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 MT-ND1P03886 318 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 RAP2AP10114 183 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 FCGR1AP12314 374 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 CSNK2A2P19784 350 aaPredicted RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 DDOSTP39656 456 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 MVDP53602 400 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 SCARB2Q14108 478 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 ANGPT1Q15389 498 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 NDUFA9Q16795 377 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 ZNF750Q32MQ0 723 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 GCNT6Q5T4J0 391 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 ENPP6Q6UWR7 440 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 GPAT4Q86UL3 456 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 PHC2Q8IXK0 858 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 TMEM102Q8N9M5 508 aaPredicted RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 TTC29Q8NA56 475 aaPredicted RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 OR5T3Q8NGG3 340 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 OR52E4Q8NGH9 312 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 S100ZQ8WXG8 99 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 ST8SIA4Q92187 359 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 CCDC74AQ96AQ1 378 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 NEURL3Q96EH8 262 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 MAGED4Q96JG8 741 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 CSF3RQ99062 836 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 NUDT16L1Q9BRJ7 211 aaKnown RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 TRIM2Q9C040 744 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 CHST8Q9H2A9 424 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 MMP27Q9H306 513 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 PIGUQ9H490 435 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 LYRM4Q9HD34 91 aa9.68□□□□□ -0.86
HERC4-207ENST00000460168 SIRT3Q9NTG7 399 aaPredicted RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 CCDC59Q9P031 241 aaKnown RBP9.68□□□□□ -0.86
HERC4-207ENST00000460168 CPED1A4D0V7 1026 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 MYO1GB0I1T2 1018 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 SIGLEC6O43699 453 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 SMPD2O60906 423 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 DNAJB6O75190 326 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 ZNF780AO75290 641 aaPredicted RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 RDH16O75452 317 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 PRKD3O94806 890 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 ZNF682O95780 498 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 YES1P07947 543 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 SP9P0CG40 484 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 CBLP22681 906 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 PTBP1P26599 531 aaKnown RBP eCLIP9.67□□□□□ -0.86
HERC4-207ENST00000460168 G0S2P27469 103 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 AQP1P29972 269 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 CSF2RBP32927 897 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 PTGER1P34995 402 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 GPX4P36969 197 aaPredicted RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 RPS26P62854 115 aaKnown RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 HSD11B2P80365 405 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 SIM1P81133 766 aaPredicted RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 SHC2P98077 582 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 VEZF1Q14119 521 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 ZNF267Q14586 743 aaPredicted RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 PON3Q15166 354 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 NR0B2Q15466 257 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 ZNF528Q3MIS6 628 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 SAXO2Q658L1 398 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 TYW3Q6IPR3 259 aaKnown RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 XKRXQ6PP77 449 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 CEACAM20Q6UY09 585 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 KANSL1Q7Z3B3 1105 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 C6orf120Q7Z4R8 191 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 SPRED1Q7Z699 444 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 FAM86B1Q8N7N1 296 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 OR9A4Q8NGU2 314 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 OR2I1PQ8NGU4 316 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 PSMA8Q8TAA3 256 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 SUN3Q8TAQ9 357 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 MAGEE2Q8TD90 523 aaPredicted RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 DTD1Q8TEA8 209 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 TCEAL3Q969E4 200 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 SH3YL1Q96HL8 342 aaPredicted RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 PELOQ9BRX2 385 aaKnown RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 ZCCHC3Q9NUD5 404 aaKnown RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 SAMD4AQ9UPU9 718 aaKnown RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 RP1P56715 2156 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 A0A1W2PS29 197 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 FAM149AA5PLN7 773 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 TRABD2BA6NFA1 517 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 TTLL8A6PVC2 850 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 A8MXE2 369 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 TNFRSF21O75509 655 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 GPX5O75715 221 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 RAB3DO95716 219 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 FBP1P09467 338 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 CD46P15529 392 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 CD1CP29017 333 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 AVPR2P30518 371 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 KDELR2P33947 212 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 KIR3DL2P43630 455 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 GLO1Q04760 184 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 DNASE1L3Q13609 305 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 ALKBH1Q13686 389 aaKnown RBP9.67□□□□□ -0.86
HERC4-207ENST00000460168 PRTGQ2VWP7 1150 aa9.67□□□□□ -0.86
HERC4-207ENST00000460168 GUSBP11Q6P575 273 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms