RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ZNF639Q9UID6 485 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 PMF1-BGLAPU3KQ54 211 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 ELOVL7A1L3X0 281 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 ANKRD34BA5PLL1 514 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 OPN1SWP03999 348 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 PTBP1P26599 531 aaKnown RBP eCLIP9.55□□□□□ -0.88
USP39-210ENST00000459775 RFX3P48380 749 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 PRIM2P49643 509 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 CRYBA2P53672 197 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 RNF4P78317 190 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 PRR5P85299 388 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 SERTAD2Q14140 314 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 FLOT2Q14254 428 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 HABP2Q14520 560 aaPredicted RBP9.55□□□□□ -0.88
USP39-210ENST00000459775 GLYATQ6IB77 296 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 LRRC69Q6ZNQ3 347 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 MED25Q71SY5 747 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 VASH1Q7L8A9 365 aaPredicted RBP9.55□□□□□ -0.88
USP39-210ENST00000459775 ARPINQ7Z6K5 226 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 VASH2Q86V25 355 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 MICU2Q8IYU8 434 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 ZNF615Q8N8J6 731 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 C16orf52Q8NHV5 167 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 SLC38A5Q8WUX1 472 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 ZG16BQ96DA0 208 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 NXPE2Q96DL1 559 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 USB1Q9BQ65 265 aaKnown RBP9.55□□□□□ -0.88
USP39-210ENST00000459775 QRSL1Q9H0R6 528 aaKnown RBP9.55□□□□□ -0.88
USP39-210ENST00000459775 OR10A5Q9H207 317 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 NUDT15Q9NV35 164 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 FAF1Q9UNN5 650 aaPredicted RBP9.55□□□□□ -0.88
USP39-210ENST00000459775 AK5Q9Y6K8 562 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 PTPRBP23467 1997 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 A0A0A6YYJ9 748 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 TRABD2BA6NFA1 517 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 PCDH17O14917 1159 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 FCMRO60667 390 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 RAD1O60671 282 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 CBR3O75828 277 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 ZIC2O95409 532 aaPredicted RBP9.55□□□□□ -0.88
USP39-210ENST00000459775 PSMG1O95456 288 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 KRT75O95678 551 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 MT-ND1P03886 318 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 BCHEP06276 602 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 PLA2G2AP14555 144 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 RBMS1P29558 406 aaKnown RBP9.55□□□□□ -0.88
USP39-210ENST00000459775 OTX2P32243 289 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 DLSTP36957 453 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 IL10RAQ13651 578 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 RAPSNQ13702 412 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 VMACQ2NL98 169 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 GCNT6Q5T4J0 391 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 C6orf183Q5T699 404 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 ATP1A1-AS1Q5TC04 95 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 DESI1Q6ICB0 168 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 NPSR1Q6W5P4 371 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 ZAR1Q86SH2 424 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 ZNF605Q86T29 641 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 SERPINA11Q86U17 422 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 DHFR2Q86XF0 187 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 NLGN4XQ8N0W4 816 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 NLGN4YQ8NFZ3 816 aaPredicted RBP9.55□□□□□ -0.88
USP39-210ENST00000459775 OR56A1Q8NGH5 318 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 ZNF675Q8TD23 568 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 ZNF721Q8TF20 911 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 PTP4A1Q93096 173 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 NKD1Q969G9 470 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 FKBP10Q96AY3 582 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 ITPAQ9BY32 194 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 RUBCNLQ9H714 662 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 C14orf105Q9NVL8 296 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 NTMQ9P121 344 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 PTGFRNQ9P2B2 879 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 KCNN3Q9UGI6 736 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 ZNF223Q9UK11 482 aaPredicted RBP9.55□□□□□ -0.88
USP39-210ENST00000459775 TCFL5Q9UL49 500 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 PCDHGA8Q9Y5G5 932 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 HS3ST3B1Q9Y662 390 aa9.55□□□□□ -0.88
USP39-210ENST00000459775 DMXL2Q8TDJ6 3036 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 FASNP49327 2511 aaKnown RBP9.54□□□□□ -0.88
USP39-210ENST00000459775 NPIPA5A0A0B4J1W7 369 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 BLACEA4D250 179 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 CDRT15L2A8MXV6 281 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 B8ZZF3 427 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 NPIPA7E9PJI5 369 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 CXCR6O00574 342 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 GSTA4O15217 222 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 CIB2O75838 187 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 IGKV3-11P04433 115 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 TFPTP0C1Z6 253 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 NPIPA8P0DM63 369 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 PF4V1P10720 104 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 GGT1P19440 569 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 GALP22466 123 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 HTR1EP28566 365 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 GABRA3P34903 492 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 STAT5AP42229 794 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 FUT7Q11130 342 aa9.54□□□□□ -0.88
USP39-210ENST00000459775 ZNF155Q12901 538 aaPredicted RBP9.54□□□□□ -0.88
USP39-210ENST00000459775 RIPK1Q13546 671 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms