RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 FAM72DQ6L9T8 149 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 KCNIP4Q6PIL6 250 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 FAM72BQ86X60 149 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 LIX1LQ8IVB5 337 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 ARHGAP12Q8IWW6 846 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SLC35F3Q8IY50 421 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 OR52H1Q8NGJ2 320 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 OR10R2Q8NGX6 335 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 OR2T4Q8NH00 348 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SLC39A7Q92504 469 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 RAB8BQ92930 207 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 ARMC5Q96C12 935 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 C14orf79Q96F83 325 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 PHYHIPLQ96FC7 376 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 C1QTNF3Q9BXJ4 246 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 GLIS2Q9BZE0 524 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 ACTL8Q9H568 366 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 TMEM38AQ9H6F2 299 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 MTHFD2LQ9H903 347 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 NRIP3Q9NQ35 241 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 RPH3AQ9Y2J0 694 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 LAMA4Q16363 1823 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 UBR1Q8IWV7 1749 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 MEIKINA0A087WXM9 373 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 A0A087WZY1 265 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SLC35F4A4IF30 521 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SMLR1H3BR10 107 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 I6L893 689 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 KHNYNO15037 678 aaKnown RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 GAAP10253 952 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 AKR1C4P17516 323 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 AMY2BP19961 511 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 POU3F3P20264 500 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 ARNTP27540 789 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 TM4SF1P30408 202 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 ADH7P40394 386 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 CXCL9Q07325 125 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 ENPP2Q13822 863 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 TAF1CQ15572 869 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 NXNL2Q5VZ03 156 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 OVCH1Q7RTY7 1134 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 KANSL1Q7Z3B3 1105 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 CBARPQ8N350 705 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 RASGEF1AQ8N9B8 481 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 CCDC71LQ8N9Z2 235 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 DCAF4L2Q8NA75 395 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 OR4M1Q8NGD0 313 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 OR52I1Q8NGK6 324 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 OR5H2Q8NGV7 314 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SFXN5Q8TD22 340 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 AUTS2Q8WXX7 1259 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 ST8SIA2Q92186 375 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 ZNF582Q96NG8 517 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 PTCHD1Q96NR3 888 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SEC22CQ9BRL7 303 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 TOLLIPQ9H0E2 274 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 NELFAQ9H3P2 528 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 MCCC2Q9HCC0 563 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 MRPS30Q9NP92 439 aaKnown RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SLC23A1Q9UHI7 598 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 HIF3AQ9Y2N7 669 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 A0A0B4J203 849 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 TMEM72A0PK05 275 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 C1orf226A1L170 272 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 GPR171O14626 319 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SCO1O75880 301 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 KCNK5O95279 499 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 MRPL3P09001 348 aaKnown RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 C5AR1P21730 350 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 MSR1P21757 451 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 HTR1FP30939 366 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 VIPR1P32241 457 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 MC1RQ01726 317 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SSBP1Q04837 148 aaKnown RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 CBFBQ13951 182 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 FIP1L1Q6UN15 594 aaKnown RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 MFSD6LQ8IWD5 586 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SLC35F2Q8IXU6 374 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SLC38A6Q8IZM9 456 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 RNF113BQ8IZP6 322 aaKnown RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SEMA6DQ8NFY4 1073 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 FNDC9Q8TBE3 224 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 ST7LQ8TDW4 575 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 RNF128Q8TEB7 428 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 C16orf78Q8WTQ4 265 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 RBM18Q96H35 190 aaKnown RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 ZIC5Q96T25 663 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SEMA4CQ9C0C4 833 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SLC25A31Q9H0C2 315 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 OR52A5Q9H2C5 316 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 TCEAL2Q9H3H9 227 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 PRDM9Q9NQV7 894 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 GPATCH2Q9NW75 528 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 AK6Q9Y3D8 172 aaKnown RBP4.72□□□□□ -1.65
PCDH9-203ENST00000456367 SNX11Q9Y5W9 270 aa4.72□□□□□ -1.65
PCDH9-203ENST00000456367 CCDC85CA6NKD9 419 aa4.71□□□□□ -1.65
PCDH9-203ENST00000456367 WASH3PC4AMC7 463 aa4.71□□□□□ -1.65
PCDH9-203ENST00000456367 FXYD1O00168 92 aa4.71□□□□□ -1.65
PCDH9-203ENST00000456367 GFRA2O00451 464 aa4.71□□□□□ -1.65
PCDH9-203ENST00000456367 CSTBP04080 98 aaKnown RBP4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 430.5 ms