RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 KIF16BQ96L93 1317 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 CDC42BPAQ5VT25 1732 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 DENND4BO75064 1496 aaPredicted RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 RPRD2Q5VT52 1461 aaKnown RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 MAGI2Q86UL8 1455 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 ABCA9Q8IUA7 1624 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 EIF3AQ14152 1382 aaKnown RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 KTN1Q86UP2 1357 aaKnown RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 ABCC1P33527 1531 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 CCDC162PA2VCL2 907 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 OR5H15A6NDH6 313 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 PDXKO00764 312 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 POLR2DO15514 142 aaKnown RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 B4GAT1O43505 415 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 ZNF253O75346 499 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 CPNE6O95741 557 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 PIGRP01833 764 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 LYNP07948 512 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 SFTPBP07988 381 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 HNF1AP20823 631 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 GJB2P29033 226 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 STIP1P31948 543 aaKnown RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 DRD3P35462 400 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 SUCLG1P53597 346 aaKnown RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 PRMT2P55345 433 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 CARD18P57730 90 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 EIF3EP60228 445 aaKnown RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 IGLV3-21P80748 117 aaPredicted RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 CBX1P83916 185 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 SLC3A1Q07837 685 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 TGM3Q08188 693 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 PDK3Q15120 406 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 GPAT3Q53EU6 434 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 ARMC12Q5T9G4 340 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 NKAIN2Q5VXU1 208 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 RFWD3Q6PCD5 774 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 CD164L2Q6UWJ8 174 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 FAM159AQ6UWV7 190 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 ZNF600Q6ZNG1 722 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 TMCO2Q7Z6W1 182 aaPredicted RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 UBE2J2Q8N2K1 259 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 MNS1Q8NEH6 495 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 TRPV3Q8NET8 790 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 OR52J3Q8NH60 311 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 GOLGA5Q8TBA6 731 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 BADQ92934 168 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 RASD2Q96D21 266 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 MRPL53Q96EL3 112 aaKnown RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 SLC41A3Q96GZ6 507 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 SENP8Q96LD8 212 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 GPR137Q96N19 417 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 CCNL2Q96S94 520 aaPredicted RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 NPAS2Q99743 824 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 SIKE1Q9BRV8 207 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 STMN4Q9H169 189 aaPredicted RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 FN3KRPQ9HA64 309 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 DDX28Q9NUL7 540 aaKnown RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 ARMCX1Q9P291 453 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 ZNF319Q9P2F9 582 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 TRAF3IP3Q9Y228 551 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 MRPS2Q9Y399 296 aaKnown RBP2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 MLH3Q9UHC1 1453 aa2.64□□□□□ -1.99
R3HDM1-212ENST00000456040 FAM135AQ9P2D6 1515 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 NPC1L1Q9UHC9 1359 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 TTC37Q6PGP7 1564 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 SAMD9LQ8IVG5 1584 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 TRAV9-2A0A087WT02 112 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 OR52A4PA6NMU1 304 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 NEDD8-MDP1E9PL57 170 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 M0R296 226 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 WRBO00258 174 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 SDHDO14521 159 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 POLR3GO15318 223 aaPredicted RBP2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 LRRTM2O43300 516 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 CTAG2O75638 210 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 UFL1O94874 794 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 SLITRK3O94933 977 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 CSF2P04141 144 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 PABPC4LP0CB38 370 aaKnown RBP2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 PCMT1P22061 227 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 UQCRC2P22695 453 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 PTBP1P26599 531 aaKnown RBP eCLIP2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 ALDH3B1P43353 468 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 SYKP43405 635 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 FNTAP49354 379 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 NUMBP49757 651 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 FHITP49789 147 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 GEMP55040 296 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 RPS8P62241 208 aaKnown RBP2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 SPAG1Q07617 926 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 BST1Q10588 318 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 MSLNQ13421 630 aaPredicted RBP2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 CRMP1Q14194 572 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 SELPLGQ14242 412 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 P2RY14Q15391 338 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 LTB4RQ15722 352 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 STK11Q15831 433 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 CAMK4Q16566 473 aa2.63□□□□□ -1.99
R3HDM1-212ENST00000456040 LYPLAL1Q5VWZ2 237 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms