RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 MBNL1Q9NR56 388 aaKnown RBP16.47■□□□□ 0.23
PTPN6-204ENST00000456013 RASD1Q9Y272 281 aa16.47■□□□□ 0.23
PTPN6-204ENST00000456013 MRPS23Q9Y3D9 190 aaKnown RBP16.47■□□□□ 0.23
PTPN6-204ENST00000456013 ZC3H12DA2A288 527 aaKnown RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 C7orf66A4D0T2 115 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 OTOL1A6NHN0 477 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 BHLHE40O14503 412 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 FABP7O15540 132 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 FKTNO75072 461 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 AGR2O95994 175 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 DHFRP00374 187 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 VIPR2P41587 438 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 ZNF136P52737 540 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 FCN2Q15485 313 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 PRPF38BQ5VTL8 546 aaKnown RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 ANKRD54Q6NXT1 300 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 FAM111BQ6SJ93 734 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 ZNF782Q6ZMW2 699 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 GPR135Q8IZ08 494 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 MFSD9Q8NBP5 474 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 OR52L1Q8NGH7 329 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 ZNF296Q8WUU4 475 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 SCMH1Q96GD3 660 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 TBX5Q99593 518 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 PRSS27Q9BQR3 290 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 MKRN2Q9H000 416 aaKnown RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 MED28Q9H204 178 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 SYNPO2LQ9H987 977 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 CACYBPQ9HB71 228 aaKnown RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 PRSS16Q9NQE7 514 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 INPP5EQ9NRR6 644 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 LYARQ9NX58 379 aaKnown RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 NTMQ9P121 344 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 SLC23A1Q9UHI7 598 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 ZNF223Q9UK11 482 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 TMA7Q9Y2S6 64 aaKnown RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 WDR45Q9Y484 360 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 TBC1D3KA0A087X1G2 549 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 TBC1D3BA6NDS4 549 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 TBC1D3FA6NER0 549 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 LATO43561 262 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 PLPP2O43688 288 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 RFPL3O75679 317 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 PTNP21246 168 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 COL9A2Q14055 689 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 KRT33BQ14525 404 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 AGERQ15109 404 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 CEP78Q5JTW2 689 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 TBC1D3GQ6DHY5 549 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 PYHIN1Q6K0P9 492 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 OR7G2Q8NG99 324 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 FANK1Q8TC84 345 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 KISS1RQ969F8 398 aaPredicted RBP16.46■□□□□ 0.23
PTPN6-204ENST00000456013 MS4A4EQ96PG1 132 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 DPH1Q9BZG8 443 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 WDR26Q9H7D7 661 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 STMN3Q9NZ72 180 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 KCNK6Q9Y257 313 aa16.46■□□□□ 0.23
PTPN6-204ENST00000456013 TBXA2RP21731 343 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 STXBP1P61764 594 aaKnown RBP16.45■□□□□ 0.22
PTPN6-204ENST00000456013 HTRA4P83105 476 aaPredicted RBP16.45■□□□□ 0.22
PTPN6-204ENST00000456013 NTRK2Q16620 822 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 ARHGAP11BQ3KRB8 267 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 BCL2L15Q5TBC7 163 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 ARL9Q6T311 187 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 LNX2Q8N448 690 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 LRRC17Q8N6Y2 441 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 C10orf90Q96M02 699 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 HS6ST2Q96MM7 605 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 TIMM29Q9BSF4 260 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 HCAR1Q9BXC0 346 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPN6-204ENST00000456013 GHITMQ9H3K2 345 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 SIDT1Q9NXL6 827 aaKnown RBP16.45■□□□□ 0.22
PTPN6-204ENST00000456013 B3GNT2Q9NY97 397 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 TEKT2Q9UIF3 430 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 ING4Q9UNL4 249 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 A0A0G2JK05 382 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 EEF1E1O43324 174 aaKnown RBP16.45■□□□□ 0.22
PTPN6-204ENST00000456013 NOS1APO75052 506 aaPredicted RBP16.45■□□□□ 0.22
PTPN6-204ENST00000456013 PCDH8O95206 1070 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 CRYZL1O95825 349 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 MT-ND5P03915 603 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 ASGR2P07307 311 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 PEBP1P30086 187 aaKnown RBP16.45■□□□□ 0.22
PTPN6-204ENST00000456013 DRD3P35462 400 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 EEF1A1P68104 462 aaKnown RBP16.45■□□□□ 0.22
PTPN6-204ENST00000456013 EIPR1Q53HC9 387 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 FAM27D1Q5T7N8 215 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 ADGRD2Q7Z7M1 963 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 GPALPP1Q8IXQ4 340 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 RNF113BQ8IZP6 322 aaKnown RBP16.45■□□□□ 0.22
PTPN6-204ENST00000456013 DTX3Q8N9I9 347 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 GPR137Q96N19 417 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 ABHD1Q96SE0 405 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 CD180Q99467 661 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 NDC1Q9BTX1 674 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 PCDH10Q9P2E7 1040 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 GPSM3Q9Y4H4 160 aa16.45■□□□□ 0.22
PTPN6-204ENST00000456013 SCN3AQ9NY46 2000 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms