RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 FAM174AQ8TBP5 190 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 DOK4Q8TEW6 326 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 C1GALT1C1Q96EU7 318 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 HS6ST2Q96MM7 605 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 GDF15Q99988 308 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 ZNF559Q9BR84 538 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 OR52D1Q9H346 318 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 FAM60AQ9NP50 221 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 CLCA2Q9UQC9 943 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 BRWD1Q9NSI6 2320 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 TDRD6O60522 2096 aaKnown RBP13.97□□□□□ -0.17
LDLR-202ENST00000455727 TRDV1A0A1B0GX56 115 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 J3QRE1 110 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 RGS5O15539 181 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 RCBTB2O95199 551 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 CBX7O95931 251 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 ST6GAL1P15907 406 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 PPP1CAP62136 330 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 RPS25P62851 125 aaKnown RBP13.97□□□□□ -0.17
LDLR-202ENST00000455727 ZNF438Q7Z4V0 828 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 LHFPL3Q86UP9 236 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 GRAMD2AQ8IUY3 354 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 CDK20Q8IZL9 346 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 VWA5B2Q8N398 1253 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 KLHL36Q8N4N3 616 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 OR4F15Q8NGB8 312 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 OR52L1Q8NGH7 329 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 SETD6Q8TBK2 473 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 HTRA1Q92743 480 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 TMEM203Q969S6 136 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 LMF2Q9BU23 707 aaKnown RBP13.97□□□□□ -0.17
LDLR-202ENST00000455727 HINT3Q9NQE9 182 aaKnown RBP13.97□□□□□ -0.17
LDLR-202ENST00000455727 CAB39Q9Y376 341 aaPredicted RBP13.97□□□□□ -0.17
LDLR-202ENST00000455727 CMAHPQ9Y471 501 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 V9GYH0 126 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 BHLHE40O14503 412 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 AQP9O43315 295 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 HCRTR1O43613 425 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 KCNK2O95069 426 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 BMP7P18075 431 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 TBXA2RP21731 343 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 CTBP2P56545 445 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 ZNF155Q12901 538 aaPredicted RBP13.97□□□□□ -0.17
LDLR-202ENST00000455727 CRTC2Q53ET0 693 aaPredicted RBP13.97□□□□□ -0.17
LDLR-202ENST00000455727 FIGNL1Q6PIW4 674 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 CXXC5Q7LFL8 322 aaKnown RBP13.97□□□□□ -0.17
LDLR-202ENST00000455727 SHFQ7M4L6 423 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 CPOQ8IVL8 374 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 LNX2Q8N448 690 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 ZDHHC1Q8WTX9 485 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 DPH1Q9BZG8 443 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 STARD5Q9NSY2 213 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 ERVK13-1Q9NX77 482 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 WSB2Q9NYS7 404 aaPredicted RBP13.97□□□□□ -0.17
LDLR-202ENST00000455727 PLEKHB1Q9UF11 243 aaPredicted RBP13.97□□□□□ -0.17
LDLR-202ENST00000455727 CYP8B1Q9UNU6 501 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 CSNK1G3Q9Y6M4 447 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 TMEM131Q92545 1883 aa13.97□□□□□ -0.17
LDLR-202ENST00000455727 A0A1W2PPC4 97 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 GXYLT2A0PJZ3 443 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 BLACEA4D250 179 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 AKAP8O43823 692 aaKnown RBP13.96□□□□□ -0.17
LDLR-202ENST00000455727 SRPX2O60687 465 aaPredicted RBP13.96□□□□□ -0.17
LDLR-202ENST00000455727 RDH16O75452 317 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 DLGAP3O95886 979 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 APOA1P02647 267 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 IFI30P13284 250 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 MAKP20794 623 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 S1PR1P21453 382 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 FXYD6P3P58550 94 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 PRTGQ2VWP7 1150 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 AMZ1Q400G9 498 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 ARMC4Q5T2S8 1044 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 GDPD3Q7L5L3 318 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 PARGQ86W56 976 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 C19orf47Q8N9M1 422 aaKnown RBP13.96□□□□□ -0.17
LDLR-202ENST00000455727 OR9A4Q8NGU2 314 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 FANK1Q8TC84 345 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 TPK1Q9H3S4 243 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 TMEM27Q9HBJ8 222 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 TNFRSF10DQ9UBN6 386 aa13.96□□□□□ -0.17
LDLR-202ENST00000455727 PAIP2BQ9ULR5 123 aaKnown RBP13.96□□□□□ -0.17
LDLR-202ENST00000455727 NPIPA5A0A0B4J1W7 369 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 NPIPA7E9PJI5 369 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 OR10H2O60403 315 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 SLC2A10O95528 541 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 NPIPA8P0DM63 369 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 TYRP1P17643 537 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 GALP22466 123 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 SKP1P63208 163 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 PSG6Q00889 435 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 FABP5Q01469 135 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 MXD1Q05195 221 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 ZSWIM7Q19AV6 140 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 GARNL3Q5VVW2 1013 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 ZNF761Q86XN6 746 aaPredicted RBP13.96□□□□□ -0.18
LDLR-202ENST00000455727 MCATQ8IVS2 390 aaKnown RBP13.96□□□□□ -0.18
LDLR-202ENST00000455727 LAX1Q8IWV1 398 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 FRMD1Q8N878 549 aa13.96□□□□□ -0.18
LDLR-202ENST00000455727 FAM181AQ8N9Y4 354 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms