RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 TAGAPQ8N103 731 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 MYO1HQ8N1T3 1032 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 RFLNBQ8N5W9 214 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 OTUD6BQ8N6M0 293 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 WDSUB1Q8N9V3 476 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 C17orf47Q8NEP4 570 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 OR1J4Q8NGS1 313 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 SGMS2Q8NHU3 365 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 RAB3IL1Q8TBN0 382 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 SMAP2Q8WU79 429 aaPredicted RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 HGDQ93099 445 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 ADIPOR1Q96A54 375 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 PPWD1Q96BP3 646 aaKnown RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 RBM18Q96H35 190 aaKnown RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 ZC3HAV1LQ96H79 300 aaKnown RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 PDLIM5Q96HC4 596 aaKnown RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 TSNARE1Q96NA8 513 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 KRT12Q99456 494 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 MAPKAP1Q9BPZ7 522 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 TRAF4Q9BUZ4 470 aaPredicted RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 ACTRT3Q9BYD9 372 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 TSGA10Q9BZW7 698 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 CCDC68Q9H2F9 335 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 RNF122Q9H9V4 155 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 PLSCR4Q9NRQ2 329 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 SNX15Q9NRS6 342 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 SERTAD4Q9NUC0 356 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 MRPS18AQ9NVS2 196 aaKnown RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.28□□□□□ -1.886e-39■□□□□ 8.5
RBM39-220ENST00000455343 TRMT6Q9UJA5 497 aaKnown RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 FBXO5Q9UKT4 447 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 IKZF3Q9UKT9 509 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 ZNF490Q9ULM2 529 aaPredicted RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 MRPS18CQ9Y3D5 142 aaKnown RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 MAGED1Q9Y5V3 778 aaPredicted RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 MAD1L1Q9Y6D9 718 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 RYR3Q15413 4870 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 C2orf92A0A1B0GVN3 265 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 MAGEB16A2A368 324 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 FAM234BA2RU67 622 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 CTAGE9A4FU28 777 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 ANKDD1BA6NHY2 528 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 SLC22A20A6NK97 555 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 WASHC1A8K0Z3 465 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 MIF4GDA9UHW6 222 aaKnown RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 B4DXG7 233 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 CDC7O00311 574 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 RTCAO00442 366 aaKnown RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 TP73O15350 636 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 ZIC3O60481 467 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 GUCA1CO95843 209 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 MBD3O95983 291 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 CHEK2O96017 543 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 ABCB1P08183 1280 aaPredicted RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 IGHV4-31P0DP07 118 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 SLC25A16P16260 332 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 GNAZP19086 355 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 CD22P20273 847 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 PSMB1P20618 241 aaKnown RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 S1PR1P21453 382 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 HIST1H1TP22492 207 aaPredicted RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 ABCD3P28288 659 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 SRD5A2P31213 254 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 HPDP32754 393 aaPredicted RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 GCKP35557 465 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 CASP2P42575 452 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 KCNJ5P48544 419 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 TMED10P49755 219 aaKnown RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 CDKN2DP55273 166 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 DSCR9P59020 149 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 B3GALT5-AS1P59052 145 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 HERVK_113P63132 956 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 ERVK-8P63133 956 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 CDKL1Q00532 357 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 PLIN5Q00G26 463 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 SRYQ05066 204 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 GPS1Q13098 491 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 TBX2Q13207 712 aaPredicted RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 DHX34Q14147 1143 aaKnown RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 FGFBP1Q14512 234 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 SQLEQ14534 574 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 ZNF267Q14586 743 aaPredicted RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 TOMM20Q15388 145 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 FAM174BQ3ZCQ3 159 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 ZNF672Q499Z4 452 aaPredicted RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 PLAC9Q5JTB6 97 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 FAM120AOSQ5T036 256 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 NCMAPQ5T1S8 102 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 RBM20Q5T481 1227 aaKnown RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 C18orf63Q68DL7 685 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 CYB5R2Q6BCY4 276 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 ADNP2Q6IQ32 1131 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 AAGABQ6PD74 315 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 ANGPTL8Q6UXH0 198 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 C4orf22Q6V702 233 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 C12orf54Q6X4T0 127 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 ZNF66Q6ZN08 573 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 ZNF551Q7Z340 670 aaPredicted RBP3.27□□□□□ -1.89
RBM39-220ENST00000455343 NUP54Q7Z3B4 507 aa3.27□□□□□ -1.89
RBM39-220ENST00000455343 IFNEQ86WN2 208 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms