RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 EFHD2Q96C19 240 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-213ENST00000454468 DEPDC7Q96QD5 511 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 MENTQ9BUN1 341 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 HHATLQ9HCP6 504 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 A0A1W2PRG6 482 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 A0A1W2PRQ8 180 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 GPR89AB7ZAQ6 455 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 HRO43593 1189 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 HCRTR1O43613 425 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 GPR89BP0CG08 455 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 SPNP16150 400 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 SDHBP21912 280 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 BMP8BP34820 402 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 NR4A2P43354 598 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 TNFRSF4P43489 277 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 FUT5Q11128 374 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 COX10Q12887 443 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 CACNA1EQ15878 2313 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 MTFR2Q6P444 385 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 BMP8AQ7Z5Y6 402 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF433Q8N7K0 673 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-213ENST00000454468 TMEM52Q8NDY8 209 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 NEIL3Q8TAT5 605 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 THAP3Q8WTV1 239 aaPredicted RBP11.16□□□□□ -0.62
SMPD4-213ENST00000454468 CNOT9Q92600 299 aaKnown RBP11.16□□□□□ -0.62
SMPD4-213ENST00000454468 OSTF1Q92882 214 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 MED12Q93074 2177 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF559Q9BR84 538 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 OR52D1Q9H346 318 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 STUB1Q9UNE7 303 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 MED31Q9Y3C7 131 aa11.16□□□□□ -0.62
SMPD4-213ENST00000454468 PLXNB3Q9ULL4 1909 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 PCP4L1A6NKN8 68 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 RIIAD1A6NNX1 92 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 PRR23D1E9PI22 279 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-213ENST00000454468 CHST10O43529 356 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 PRR23D2P0DMB1 279 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-213ENST00000454468 CLUP10909 449 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 MAOAP21397 527 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 PYCR1P32322 319 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 WNT4P56705 351 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 TRA2BP62995 288 aaKnown RBP11.15□□□□□ -0.62
SMPD4-213ENST00000454468 OR1Q1Q15612 314 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF836Q6ZNA1 936 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 LYSMD2Q8IV50 215 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 MFSD4AQ8N468 514 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 SUN5Q8TC36 379 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 ACOT11Q8WXI4 607 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-213ENST00000454468 TRMT61AQ96FX7 289 aaKnown RBP11.15□□□□□ -0.62
SMPD4-213ENST00000454468 SLC6A18Q96N87 628 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 OR2A14Q96R47 310 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 SERINC2Q96SA4 455 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 SDF2Q99470 211 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 MAP3K3Q99759 626 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 FAM60AQ9NP50 221 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 PLCXD1Q9NUJ7 323 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 OBP2AQ9NY56 170 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 TEKT2Q9UIF3 430 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 OSGIN1Q9UJX0 560 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 USP34Q70CQ2 3546 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 DENND4CQ5VZ89 1909 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 SAGE2PA6NJ88 616 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 PLOD3O60568 738 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 RPP14O95059 124 aaKnown RBP11.15□□□□□ -0.62
SMPD4-213ENST00000454468 GABRG2P18507 467 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 HMGA2P52926 109 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 OR2B6P58173 313 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 BTG2P78543 158 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 KCNAB1Q14722 419 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 KIR2DS3Q14952 304 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 NDUFA9Q16795 377 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 PRAMEF17Q5VTA0 474 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 C1orf189Q5VU69 101 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 TTLL10Q6ZVT0 673 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 PAQR7Q86WK9 346 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 KIF18BQ86Y91 864 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 PHC2Q8IXK0 858 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 KLHL36Q8N4N3 616 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 RIT1Q92963 219 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 ZMYND19Q96E35 227 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-213ENST00000454468 ZFP3Q96NJ6 502 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 ERMAPQ96PL5 475 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-213ENST00000454468 GAL3ST1Q99999 423 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 CNOT2Q9NZN8 540 aaKnown RBP11.15□□□□□ -0.62
SMPD4-213ENST00000454468 ERVK-19Q9WJR5 959 aa11.15□□□□□ -0.62
SMPD4-213ENST00000454468 UNC119BA6NIH7 251 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 PRODHO43272 600 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 EIF2DP41214 584 aaKnown RBP11.15□□□□□ -0.63
SMPD4-213ENST00000454468 OR1D4P47884 311 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 LSSP48449 732 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 RAB30Q15771 203 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 ALG10BQ5I7T1 473 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 NRARPQ7Z6K4 114 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 VWA5B2Q8N398 1253 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF563Q8TA94 476 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 PHOSPHO1Q8TCT1 267 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 TMEM239Q8WW34 195 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 C20orf141Q9NUB4 165 aa11.15□□□□□ -0.63
SMPD4-213ENST00000454468 TXNL4BQ9NX01 149 aaKnown RBP11.15□□□□□ -0.63
SMPD4-213ENST00000454468 TANC1Q9C0D5 1861 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms