RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 MOAP1Q96BY2 351 aa16.41■□□□□ 0.22
SQSTM1-204ENST00000453046 CLPTM1LQ96KA5 538 aa16.41■□□□□ 0.22
SQSTM1-204ENST00000453046 NODALQ96S42 347 aa16.41■□□□□ 0.22
SQSTM1-204ENST00000453046 TIMP4Q99727 224 aa16.41■□□□□ 0.22
SQSTM1-204ENST00000453046 SLC35A5Q9BS91 424 aa16.41■□□□□ 0.22
SQSTM1-204ENST00000453046 OSBPL11Q9BXB4 747 aa16.41■□□□□ 0.22
SQSTM1-204ENST00000453046 UBQLN3Q9H347 655 aa16.41■□□□□ 0.22
SQSTM1-204ENST00000453046 RAD21L1Q9H4I0 556 aa16.41■□□□□ 0.22
SQSTM1-204ENST00000453046 SLC24A3Q9HC58 644 aa16.41■□□□□ 0.22
SQSTM1-204ENST00000453046 SLC6A5Q9Y345 797 aa16.41■□□□□ 0.22
SQSTM1-204ENST00000453046 NCKAP5O14513 1909 aa16.41■□□□□ 0.22
SQSTM1-204ENST00000453046 CSMD2Q7Z408 3487 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 PDZD2O15018 2839 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 RNF103-CHMP3A0A140T963 221 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 C2orf72A6NCS6 295 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 FRG2CA6NGY1 282 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 HSPB2A8KAH6 182 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 EVPLLA8MZ36 301 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 CLIC1O00299 241 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 ICOSLGO75144 302 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 UGT2B11O75310 529 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 CIB2O75838 187 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 PDE5AO76074 875 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 KRT75O95678 551 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 GPC1P35052 558 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 GCKP35557 465 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 SOX18P35713 384 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 KRTAP10-9P60411 292 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 CRYZQ08257 329 aaKnown RBP16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 MYBPHQ13203 477 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 SNTA1Q13424 505 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 CEACAM7Q14002 265 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 HSPB2Q16082 182 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 SLC25A35Q3KQZ1 300 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 EIPR1Q53HC9 387 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 DESI1Q6ICB0 168 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 LIX1LQ8IVB5 337 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 DMRTC2Q8IXT2 367 aaPredicted RBP16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 TMCO6Q96DC7 493 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 AURKBQ96GD4 344 aaPredicted RBP16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 ZNF559Q9BR84 538 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 ALG2Q9H553 416 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 IKZF5Q9H5V7 419 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 CXorf36Q9H7Y0 433 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 ANKRA2Q9H9E1 313 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 TPT1P8Q9HAU6 139 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 GALNT9Q9HCQ5 603 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 CD300AQ9UGN4 299 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 SLC7A8Q9UHI5 535 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 CAMK2AQ9UQM7 478 aa16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 GPR55Q9Y2T6 319 aaPredicted RBP16.4■□□□□ 0.22
SQSTM1-204ENST00000453046 POLQO75417 2590 aa16.39■□□□□ 0.22
SQSTM1-204ENST00000453046 PRORSD1PA6NEY8 169 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 FAM220BPB1ANY3 271 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 TO15178 435 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 ME2P23368 584 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 MAGEA8P43361 318 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 BNIP2Q12982 314 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 FADDQ13158 208 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 SELPLGQ14242 412 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 SPDYE7PQ495Y7 208 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 ACSF3Q4G176 576 aaPredicted RBP16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 WIPI1Q5MNZ9 446 aaPredicted RBP16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 TMEM81Q6P7N7 255 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 BHLHB9Q6PI77 547 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 OR56A1Q8NGH5 318 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 ABTB1Q969K4 478 aaPredicted RBP16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 TMBIM1Q969X1 311 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 CCDC124Q96CT7 223 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 NEURL3Q96EH8 262 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 COL21A1Q96P44 957 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 THUMPD3Q9BV44 507 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 SPATA9Q9BWV2 254 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 MUC13Q9H3R2 512 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 KAT8Q9H7Z6 458 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 SNX8Q9Y5X2 465 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 OTOGQ6ZRI0 2925 aa16.39■□□□□ 0.21
SQSTM1-204ENST00000453046 HCFC1P51610 2035 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 PRAMEF25A6NGN4 478 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 PLOD2O00469 737 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 SNPHO15079 494 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 ABCB7O75027 752 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 CBR3O75828 277 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 EPPINO95925 133 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 IL2RAP01589 272 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 FREM3P0C091 2139 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 BMP7P18075 431 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 GPX2P18283 190 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 IL12BP29460 328 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 CHI3L1P36222 383 aaPredicted RBP16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 GSK3BP49841 420 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 PRR5P85299 388 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 LIPEQ05469 1076 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 FXNQ16595 210 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 SAXO2Q658L1 398 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 VASNQ6EMK4 673 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 SERPINA11Q86U17 422 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 YRDCQ86U90 279 aaKnown RBP16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 TMEM200AQ86VY9 491 aa16.38■□□□□ 0.21
SQSTM1-204ENST00000453046 LACC1Q8IV20 430 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms